Gene GM21_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2895 
Symbol 
ID8138238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3362296 
End bp3363204 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID644870495 
ProductAuxin Efflux Carrier 
Protein accessionYP_003022684 
Protein GI253701495 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value4.94546e-22 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAATT TCGCGCTGAT CGGGGTCTTT GTCCTTTTGG GGATGCTCTT TCGCCGCCTC 
GAGGCTTTTC CCAAGGATTC GGCCCAGGTG CTCAACGTCT TCACCCTTTA TGTTTCGTTG
CCGGCGCTGA TACTCCTCAA GGTGCCGCAG ATCGTCTTTT CCCCAGAGAT CGCCATTGCG
GTGGCTATTC CGTGGGGGCT GCTGGCTTTT TCCGCCCTGC TGGTGCTTTT GGCGGCGCGG
CTTTGGGGGT GGGGGCGGTC GGTCACGGGG GTACTGCTGC TGGTCGTTCC GCTGGGAAAC
ACCTCCTTTC TCGGCATACC CATGATACAG GCTTTCTTTG GACCGGCAGG CTTTCCGTAC
CTGATCATCT ACGACCAGAT CGGCACGATG ATGATCATGG CGACATACGG CTCCTTCATT
CTTGCGGTGT ACGGCAAGGG GAGGTCGCTA AACCTCTCCG CTGTGGCAAG AAAGGCCCTG
CTGTTCCCCC CCACCCTGGC CTTGATCCTC GGCCTTGCCT CCCGTTCCTT GCCATATCCG
GAAAAACTCG TGCAGTGCCT GCAGAGCGTC GCCGCCACCT TGGTACCCGT CGTCATGACG
GCGATAGGGC TGCAGATCCG GTTTAGGCTT CCTGCACGGG TAGTTGCGCC GCTTGGATTC
GGACTGGCTA TCAAGCTTTT GGTCGCTCCA CTGGTCGCCT TGGTGGTTTG CCGGTTGACA
GGCCTAAACG GGATGGTGGT CGATGTCTCG ATAATCGAAG CCGCCATGCC TCCGATGGTT
ACTGCAGGCG CCTTGGCAGT CGTAGCTGGC ATGGATGCCG ATCTGGCGGT GGCCTTGATC
GGGATCGGCA TAATACTTTC TTTCGGCACC CTCCCCATGA TTTTCTGGCT GACGAGGGTT
GTGGCCTGA
 
Protein sequence
MENFALIGVF VLLGMLFRRL EAFPKDSAQV LNVFTLYVSL PALILLKVPQ IVFSPEIAIA 
VAIPWGLLAF SALLVLLAAR LWGWGRSVTG VLLLVVPLGN TSFLGIPMIQ AFFGPAGFPY
LIIYDQIGTM MIMATYGSFI LAVYGKGRSL NLSAVARKAL LFPPTLALIL GLASRSLPYP
EKLVQCLQSV AATLVPVVMT AIGLQIRFRL PARVVAPLGF GLAIKLLVAP LVALVVCRLT
GLNGMVVDVS IIEAAMPPMV TAGALAVVAG MDADLAVALI GIGIILSFGT LPMIFWLTRV
VA