Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2816 |
Symbol | |
ID | 8138159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3276084 |
End bp | 3277859 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644870418 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_003022607 |
Protein GI | 253701418 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAGG TCGCTGACAT AACGAGGATG GAAGGGACTA CCGGCTGCGG CGACGCTTCG GGAATCGTGA GGCTCGACGC CGATCTCGGC ATCACCTACC TCGACGCGGC CGCCGCCACC TTGATTGGGA TGCCCGTGGA GAGCCTTTTG GGGCGCAGGC TAGACGAGGT GGCGGATCTC TCCGAACTCA GCACCCTGAT GAAAAGCGGC ACCGTGTTCA ACAACCAGAC GCTTCTAGCC GGCAAGAGGC GCCTTGTCTG CGACTATCTC CCGAGCATGG AGTCCGAGCA ACTTGTGGGG GGAATTTTAT CCGTCCTGCG GCTCCTCCCG GAACAGCTCC CCGATCCCTC CATCGATTTG AGGGCCCTCT TGCAGTCGGC GAGCGCCTCC CTCGACCTCA ACTACGACGG CATCATCATC GTGGACCGGG AAGCGGTGGT GGTCATGGTG AACAAGGCCT TCGCCGAAAT CCTCGACACC ACCCCCCAAG CCATCATCGG CAAGCACGTA AGCAGCGCCT ACCCGAATTC CCAGTCTTCG AAGCTGCCGG CGGTCATGGA GAGCGCCACC GCGCAGGTCG GCATCACCCA TTACCTTAAC GGCAAGCAGG TCTACGCTTC GCTCTACCCC ATCATCAAGG ACGGCCAGGT GATCGGAGGG GTCGGCAAGA TCCTCTTCAA GGACATCCGC GAGATCACCC TGATCGCGAA CCGGCTGCAG GGCGCTTCCG AGACGCGCGC GGCGGCCGGG AGCGTGGCGC GCAAGGAATC GATGTCGCGC TACGACATGA ACAACATCGT CGGGCAGAGC AAGATAATGC AGGACCTGAA GGAGGCCCTG CTTCGGGTGG CCTCCAAGAA CTCGAACATC CTCCTTCTGG GGGAAAGCGG GACCGGGAAG GAGCTTTTCG CCCACGCCAT CCACGCCGCC AGCAACCGCC GGTACGCCCA GTTCGTCAAG GTGAACTGCG CGGCGATTCC CGAGCATCTG CTGGAGTCCG AACTCTTCGG CTACGCCGAG GGGGCCTTCA CCGGGGCGAG GAAAGGGGGG CAGCTGGGGA AATTCGAACA GGCGCACCTG GGGACCATCT TTCTGGACGA GATCGGCGAT ATGCCGCTGT ACATGCAGGC GAAGATGCTG CGGGTCCTGC AGGAGAGGGA GCTGACACCC CTGGGGAGCA ACGCCCCCAA GACGGTCGAC GTGAGGGTGG TCGCCGCCAC CAACAGCAAC CTGGAGGCCC TGGTGCGGGA GGGAAAGTTC CGGCAGGACC TCTACTATCG CCTCAAGGTG GTGACGCTCT GCATCCCCGC GCTCAGGGAG CGCAAGGAAG ACATCCGCGC CCTCAGCGTG AATTTCATCC AGCAGTTCAA CGAGGAATTC GGGCTGGAGG TCCAGGGGCT GAGCCTGGAG GCCCGCGACG TGGTCATGCA CTACGACTGG CCGGGGAACG TGAGGGAGCT GCGCAACGTG ATCGAGAGCG CCTTCAACGT GGTGACCGGT CCGCTCATCC TCAAGGAGCA CCTCCCGGAC CAGCTCTCCA GGATGCTCCG TGACGGCAGC TCGGGTATCC CGCATGACAT CGGCCCCTAC CTGCGCGCGA GGCTTGGGAG CAAACCGCTT CCAGCCATCG TCGAGGAGTT CGAGAAGCTG CTGGTGGAGG CCGCCATCGA GTTTTGCAAC GGCAACAAGC TGCAGGCCGC CGATCTGCTC GGCATCTCCC GGCAGTGGCT GTACAAGAAG CTGCAGAAGC ATCACGACGA CTCTTCCGAC AGATAA
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Protein sequence | MVQVADITRM EGTTGCGDAS GIVRLDADLG ITYLDAAAAT LIGMPVESLL GRRLDEVADL SELSTLMKSG TVFNNQTLLA GKRRLVCDYL PSMESEQLVG GILSVLRLLP EQLPDPSIDL RALLQSASAS LDLNYDGIII VDREAVVVMV NKAFAEILDT TPQAIIGKHV SSAYPNSQSS KLPAVMESAT AQVGITHYLN GKQVYASLYP IIKDGQVIGG VGKILFKDIR EITLIANRLQ GASETRAAAG SVARKESMSR YDMNNIVGQS KIMQDLKEAL LRVASKNSNI LLLGESGTGK ELFAHAIHAA SNRRYAQFVK VNCAAIPEHL LESELFGYAE GAFTGARKGG QLGKFEQAHL GTIFLDEIGD MPLYMQAKML RVLQERELTP LGSNAPKTVD VRVVAATNSN LEALVREGKF RQDLYYRLKV VTLCIPALRE RKEDIRALSV NFIQQFNEEF GLEVQGLSLE ARDVVMHYDW PGNVRELRNV IESAFNVVTG PLILKEHLPD QLSRMLRDGS SGIPHDIGPY LRARLGSKPL PAIVEEFEKL LVEAAIEFCN GNKLQAADLL GISRQWLYKK LQKHHDDSSD R
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