Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2747 |
Symbol | |
ID | 8138090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3194085 |
End bp | 3196745 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644870352 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003022541 |
Protein GI | 253701352 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 146 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAACC GCGCCCTCAA CCTGAGATCG AAGATATTCG CCATATTCCT GGCCATGTCC ATGGCAACCA TGGTGGGCAT GGTCGTGATC GCCCTTTTGT TCATCAAGCC GCTTCTGGAA TCGAAGCTGG AAAAACGCGG CCAATCCATA GCCCACGCCA TCTCCTACCA GTGCACCAAC CCGATCCTCT CCAGGAATTT CCTTCAACTG GACCTGTTCT TACGCGAATA CACCCATTCG GAAGGCGACG TGGCCTACAT CTACGTCACG TCGCCGGACG GTGAGGTCAT CAGTCACTCC TTCGGCCGTA CATTCCCAGT GGCGCTCAAA GAGTTGAGCC GGCGGGCCGG GAAAAAGCCC GGCGGGAGCA CCAGGCTCCA AACGACAGAA GGAGACGTAA TCCAGATCTC GGAACCCATC CTCGACGGGC ATCTGGGCAG GCTGCATGTG GGGATGTCCG CCGACCCGAT CCGCAAGGAC ATCAACGAGA TCATCATCTC CTTCGTCAGC TTCGCGGCCC TCTTTTTCTT CTCGTCCTTG CTGCTGCTAC TGTTCATCGA CAGGTGGATC GTCAGCCCCA TTTTCCAGAT CAGGTCCGTG TCGCTGAAGG TCAAAGCGGG GGATATCGAC AGCAGGGTCG CGGTGCGATC CAGGGACGAG ATCGGAAGCC TCGCTGAGGA TTTCAACGGC ATGCTCGACG CCATAAAGGA GTCCAGGGCG TCGCTGGTTC AGGAAAAACA GCTGCTGGCG GAAAGCGAAA ACAGGTTGAG GAAAATCCTC CAGCAAAGTC CCATATCCAT GGCCATGGCC TCCCCGGACG GCACCATAGA GTACATAAAC GACTACGCCG TGCAGACCTT CGGCTATCAG CCGCAGGAAT TACCCCACAT AAAGGATTGG TGGCTCAAGG CCTACCCCGA TCCCGCCTAC CGCGAGCAGG TGATCGGGCA GTGGACGGCA CTTATGGAAA AGGCTGCCGG CGACAACGGG TACATCGAGC GCCGGGAATA CCAGGTCACC TGCAAGGACG GCACGCTGAA GACCATCCTG ATCTTCGGGC TTTTGATCGA CAACGAACTC TTCGTCGTCT TCGAGGACAT AAGCTCCCTG AAGCAGGTAG AGGAGGAGTT GAGAGCGGCC AAAGAGCACC TGGACGCCAC CATGAACGCT CTGCCCGATC TCTTGTTCAG AATCGACCGG GAAGGCCGCT TCTACGATGC CCGCTACTCC AGCGCCGACG AGCTTTACCT CTCGCCGGAA CGGTTCCTCG GCAAGCGGGT GGTCGAGGTA CTGCCGCCGG AGGCTGCAGC CACCATCATG GGAGCCCTCG GCGAGGCCAT CGCTTACGGG AGCCATCGCG GGGCCACCTA CTCGCTCCCC CTGCCCCAGA GAGAGCGGTG GTACGAACTC TCAGTGGCGG CGATGGGAAA CCCGGACCTG CCGCAGACCC AATTCATCGT CCTTGCCCGC GACATCACCG AGAGAAGGCT TGCCGAGCAG GAGCGGCTCA AACTCGAACA GCAACTTCTC CACGCCCAGA AACTTGAAAG CCTCGGGGTA TTGGCGGGGG GGATCGCCCA TGACTTCAAC AACCTGCTGA CCGCCATCGT CGGCAACACC GACCTCGCCT TGATGCGTCT CAACCCGGAG TCACCGGTAC GGGACAACCT GGAGCGCATC GAGCAGGCGG CCAGCCGCGC GGCGGATCTG GCCAAGCAGA TGCTGGCGTA CTCCGGCAAG GGGAGATTCA TCATACAAAC CATCGACCTG AACCGGCTGA TCAGGGAAAT GACGCACATG CTTGAAGTTT CCGTCTCCAA GAAGGCGATC CTCAACTTCA ACCTTACCGA CCCGCTGCCG GCCATCGAGG CCGATGCCAC GCAACTGCAC CAGATCATCA TGAACCTGAT CATCAACGCC TCAGAAGCCA TCGACAAAGA GAGCGGGGTC ATCACGATTG CTACCGGCAG CATGCAGTGC GACAGGACCT ACTTGAACGG CATCTGGGTG CACGAGCAGC TTGCCGAGGG GCTCTACGTT TGGCTTGAGA TAACCGACAC AGGTTGCGGC ATGGACGCGG AAACGGTGGC CAAGATCTTC GATCCCTTCT TCACCACCAA GTTCACCGGC CGGGGGCTCG GCATGGCCGC CGTGCTCGGC ATCATCCGAG GCCACAAGGG GGCCATCACG GTCGAAAGCT ATCCCGGCCG CGGCGCCGCT TTCAAGGTCT TCCTCCCTGC CGGCGGCAAG CCGAAGGAAC CCCTCGACCA GGCAGATCGG GATGCGGCGG ACTGGAGAGG CAGCGGAACC GTGCTCTTCG TCGACGATGA ACAGACCGTC CTGGACATAG GGAGCGAGAT GCTGAAGGAA CTGGGTTTCG ATGTCGTGAC GGCGATGGAC GGCAGCGAGG CGCTGGAGCT CTTCAAACAG GACGCGGAGA GATATTCCTT CATCATCCTC GACCTGACCA TGCCCCGTCT GGACGGCGAG CAGACCTATC GGCAAATGAG GGAGCTAAAG CCCGAGGTCA AGGTCATCAT GTCCAGCGGC TACAACGAGC AGGAGATCAA CCAGCGCCTG GGCGGCACGG AGCTGGCCGG TTTCGTACAG AAGCCCTACA ACCTCTCCAC GCTCAGAGAC GTCATCAAGA ACATGAAATA A
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Protein sequence | MGNRALNLRS KIFAIFLAMS MATMVGMVVI ALLFIKPLLE SKLEKRGQSI AHAISYQCTN PILSRNFLQL DLFLREYTHS EGDVAYIYVT SPDGEVISHS FGRTFPVALK ELSRRAGKKP GGSTRLQTTE GDVIQISEPI LDGHLGRLHV GMSADPIRKD INEIIISFVS FAALFFFSSL LLLLFIDRWI VSPIFQIRSV SLKVKAGDID SRVAVRSRDE IGSLAEDFNG MLDAIKESRA SLVQEKQLLA ESENRLRKIL QQSPISMAMA SPDGTIEYIN DYAVQTFGYQ PQELPHIKDW WLKAYPDPAY REQVIGQWTA LMEKAAGDNG YIERREYQVT CKDGTLKTIL IFGLLIDNEL FVVFEDISSL KQVEEELRAA KEHLDATMNA LPDLLFRIDR EGRFYDARYS SADELYLSPE RFLGKRVVEV LPPEAAATIM GALGEAIAYG SHRGATYSLP LPQRERWYEL SVAAMGNPDL PQTQFIVLAR DITERRLAEQ ERLKLEQQLL HAQKLESLGV LAGGIAHDFN NLLTAIVGNT DLALMRLNPE SPVRDNLERI EQAASRAADL AKQMLAYSGK GRFIIQTIDL NRLIREMTHM LEVSVSKKAI LNFNLTDPLP AIEADATQLH QIIMNLIINA SEAIDKESGV ITIATGSMQC DRTYLNGIWV HEQLAEGLYV WLEITDTGCG MDAETVAKIF DPFFTTKFTG RGLGMAAVLG IIRGHKGAIT VESYPGRGAA FKVFLPAGGK PKEPLDQADR DAADWRGSGT VLFVDDEQTV LDIGSEMLKE LGFDVVTAMD GSEALELFKQ DAERYSFIIL DLTMPRLDGE QTYRQMRELK PEVKVIMSSG YNEQEINQRL GGTELAGFVQ KPYNLSTLRD VIKNMK
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