Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2672 |
Symbol | |
ID | 8138014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3108328 |
End bp | 3109530 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644870276 |
Product | hypothetical protein |
Protein accession | YP_003022466 |
Protein GI | 253701277 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0000390899 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTAAGA GTCGCAATTC AGCGCACGGC TACACCATGG TCGAGCTGGT GGTGGTGATG CTGATCTTCT CGGTGGTGAT GACCCTGATC AGTGTCTCGT TCTCCCGAAT GGTTCGCGGT TCAGGGCAGC TGCTTAAAAG CGCCGAAACC GACATCGGAG GACTCATCGG GCTGGAACTG ATGCGCAGCG ACATGGAGTC CGCCGGATTC GGGCTGTACT GGCGCGGTCC TGGTGGCGGC GCCTCCGCCG TCAGCTACAT GGAAGCCCCG GACGACCTGG TGCTGGTGAA AGACTGCCCA GACGCGAAAC CCTCCCTTTT CGACGACCGT ACCTACGACA CAGACCGATA CATCCCGCGG GCCTATCGGG TCGGCAACAA TGTAGGCTAC AACGGCTCCG ACTACTTAGT GATCAAAGGG ACCACATTGG GGACGAACAA GGTGTCCCGG GCTTGGGGCT ACCTTAACTA CAGCACGGGG AGGGTGGTTG TCCCCCCACG AGACGCAGTG AGTGAGCCGT TCAAAACAAG TGATCGTACC ATCGTCCTGA AAAGCGGGAT CTCAGCAGGA AGGGAGGTTC GGGAGCTGGT GCTGGACCAT ACTGAGTTCT CCGTATCCTA CGCCTATTCT TTCCCGGAGG CCTTCAGTCC CAAAGAACCT GGCGACAATT TTCTCGTCTA CGGAGTGGAT AAGGCAGATG ATTCGGGGGC GAAGCTCAGC TTTCCGTTCA ACAGGGCCGA CTACTACATC AACCGTCCCA GCGACATATC CCGAACCTGC GCTCCCGGGA CTGGAATCCT GTACAAGACG GTAATCACCC AGAGTGGCGA CCCGGCCTAT TATCCCATCC TCGATTGCGT AGCCGACATG CAGGTCGTGC TCCCCGTGGA CTCCAACGGG GATGGTGCGA TCGATTACCA CCTCGACGCC GAGGAATTGG ACGCGCTGGA GACACGTGAA CAGCTGAAGG AGATCCGGGT CTACATCCTG GCGCAGCAGG GAAGGAGGGA CGCCTCCTAT CTCCACCCTG TGGCGGATCC AGAGAGGGCT TTTCTTGTTG GCGACCCGGA ACTTATCAAG AAGCCGGAGA GCGCACTTGG GCGCATCTGG AGTTCGAGCA AAATGGGGGA CACCTTCGGC GGCCACTGGC GCAACTACCG CTGGAGGCTT TACACCATCG TGGTGCAGCC CAAAAACCTG TAG
|
Protein sequence | MSKSRNSAHG YTMVELVVVM LIFSVVMTLI SVSFSRMVRG SGQLLKSAET DIGGLIGLEL MRSDMESAGF GLYWRGPGGG ASAVSYMEAP DDLVLVKDCP DAKPSLFDDR TYDTDRYIPR AYRVGNNVGY NGSDYLVIKG TTLGTNKVSR AWGYLNYSTG RVVVPPRDAV SEPFKTSDRT IVLKSGISAG REVRELVLDH TEFSVSYAYS FPEAFSPKEP GDNFLVYGVD KADDSGAKLS FPFNRADYYI NRPSDISRTC APGTGILYKT VITQSGDPAY YPILDCVADM QVVLPVDSNG DGAIDYHLDA EELDALETRE QLKEIRVYIL AQQGRRDASY LHPVADPERA FLVGDPELIK KPESALGRIW SSSKMGDTFG GHWRNYRWRL YTIVVQPKNL
|
| |