Gene GM21_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2667 
Symbol 
ID8138009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3104990 
End bp3105586 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content57% 
IMG OID644870271 
ProductPilus assembly protein PilO 
Protein accessionYP_003022461 
Protein GI253701272 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000121155 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCCAC AGATAGAAAA ATTGCTCAAG CTCCCGACCA AAGAGAAGGT CGCCCTATTG 
GCTTTGGTGC TGATAGTGGA GGGGGGCGCC CTTTTCTACG GGCTGCACCG TCCAAAGATG
AACGAGCTGA AGGGGCTTAA GGCGAAGCAG GAAGAACTCC AGAAGCAGAT CCAGGAAAGC
CGCAGCATCG CCAACAACCT GCCGCGCTTC AAGGCCGAGT ACGAGCAGCT CAAGAAGGAC
CTGGACAACG CGCTCACCGA GCTTCCCAAC CAGAAGGAGA TCCCGTCGCT TCTCACCAGC
ATCTCCAACC AGGGGAAAGG GGCTGGGCTC GACTTCCTGC TCTTCAGGCC CAAGCCGGAG
GTTCCCAAGG ACTTCTACGC GGAAGTGCCG GTGGATATCG CGGTGGCTGG GACCTATTAC
CAGGTCGCCG ACTTCTTCGT CTCGGTGGGC AAGCTGCCGC GCATCGTCAA CATCACCAAC
GTCAACGTCT CTGATATCAA GGAGAGCAAC GGGCGGACCA CCCTGAAGGT TTCCTGCCTG
GCCACCACCT TCCGCTTCCT CGACCCTAAA GAGAAAAAAA ATGAAAAAAA GCCTTAA
 
Protein sequence
MDPQIEKLLK LPTKEKVALL ALVLIVEGGA LFYGLHRPKM NELKGLKAKQ EELQKQIQES 
RSIANNLPRF KAEYEQLKKD LDNALTELPN QKEIPSLLTS ISNQGKGAGL DFLLFRPKPE
VPKDFYAEVP VDIAVAGTYY QVADFFVSVG KLPRIVNITN VNVSDIKESN GRTTLKVSCL
ATTFRFLDPK EKKNEKKP