Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2667 |
Symbol | |
ID | 8138009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3104990 |
End bp | 3105586 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644870271 |
Product | Pilus assembly protein PilO |
Protein accession | YP_003022461 |
Protein GI | 253701272 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3167] Tfp pilus assembly protein PilO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000121155 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCCAC AGATAGAAAA ATTGCTCAAG CTCCCGACCA AAGAGAAGGT CGCCCTATTG GCTTTGGTGC TGATAGTGGA GGGGGGCGCC CTTTTCTACG GGCTGCACCG TCCAAAGATG AACGAGCTGA AGGGGCTTAA GGCGAAGCAG GAAGAACTCC AGAAGCAGAT CCAGGAAAGC CGCAGCATCG CCAACAACCT GCCGCGCTTC AAGGCCGAGT ACGAGCAGCT CAAGAAGGAC CTGGACAACG CGCTCACCGA GCTTCCCAAC CAGAAGGAGA TCCCGTCGCT TCTCACCAGC ATCTCCAACC AGGGGAAAGG GGCTGGGCTC GACTTCCTGC TCTTCAGGCC CAAGCCGGAG GTTCCCAAGG ACTTCTACGC GGAAGTGCCG GTGGATATCG CGGTGGCTGG GACCTATTAC CAGGTCGCCG ACTTCTTCGT CTCGGTGGGC AAGCTGCCGC GCATCGTCAA CATCACCAAC GTCAACGTCT CTGATATCAA GGAGAGCAAC GGGCGGACCA CCCTGAAGGT TTCCTGCCTG GCCACCACCT TCCGCTTCCT CGACCCTAAA GAGAAAAAAA ATGAAAAAAA GCCTTAA
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Protein sequence | MDPQIEKLLK LPTKEKVALL ALVLIVEGGA LFYGLHRPKM NELKGLKAKQ EELQKQIQES RSIANNLPRF KAEYEQLKKD LDNALTELPN QKEIPSLLTS ISNQGKGAGL DFLLFRPKPE VPKDFYAEVP VDIAVAGTYY QVADFFVSVG KLPRIVNITN VNVSDIKESN GRTTLKVSCL ATTFRFLDPK EKKNEKKP
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