| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2665 |
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| Symbol | |
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| ID | 8138007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3101662 |
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| End bp | 3104442 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644870269 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_003022459 |
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| Protein GI | 253701270 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.000377004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAGGT ACCAGTGCAG AATTCTATGT CATGCCGTGG CACTCATCGT TTTGTTGACC
GTTTCAGCAG GATGCGTGAA ACGGATGACC GCTGCGAACG AGTCTGCCCA GGCAGAGGCC
TCCGCCTTTG CGACCCTCAG GTCGGTCACG GTGTCGGCCG ACGCCACCAG CGTGGAGCTG
GTCAGCGACA AGCCGATCAC CTATACCTCC TACAAGGGGG GGGATCCGAC CCAGATCATC
GTCGACATCT CCCAAACCGA GCCGGGGGCT GTGACTTCTC CCATCGAGGT GAACCGCGGC
AACATCAAGC GGATCGAGGT CGAGCGCCAA CCTTTGGGGG GGAGCGTGCT GACGCATATG
ACGCTCGTTC TCACTAAGGA CGTCGACTTC GCGGTCGCCA CCGACCCCTC GGACAAGAGC
AGGCTCAAGA TCTACCTTCC GGTAGTGGAG CCCGAGGCGA AGGCTGAGCC GACCGAAGTC
AAGGAAGCCG CGCTTGCCGA GAGCAGGATC GACGAGAAGA CCCTGACGCC GGCTGCTGCT
ACGCCCGCCG TTGAGGCAGG CTCCGCTCCC ATCAAGGCAG AAGCCGTGCC GGCACCGCCC
GCCGCACCTG CCACGGAGTC TAAGGCAGCA ACCGCAGCTG TCGCAGAACC GAAAGCGGAT
GCCGCACCTT GGAAGGCTGG CGGCGCAGAA GGGGGGAACG GTCTCAATGC GGTCATCCCA
GGGGCGGACG GTGTGGATCT CTCCATCCAA GGGGGGGTAC AGACCTTCAA CTCCTTCAAG
TTGACCAAAC CTGACCGCAT CGTCCTCGAC CTCTTCAAGG TCAAGAACTC GCTGCCCCGG
AACGTGGTGC CTGTCAACGC CTTTGGCATC GCCAACGCCC GTGTGGGGTC GACTCCCGAC
AAGGTGCGAG TGGTGTTGGA CGCAGCGGGG GAGAGCCTTC CCCCGTACGA AGTGGTCAAG
AGCGACCTCG GGGTGAAGAT CAGGCTCAAG GGAAAGGCCA CGGCCATCGC CAAGGCTCCG
GCTGTTGAGG CCCCGGCAGC GGCGCCCGCC CCGGTTCCTG CGCCTCCCGC AGCGAAACTG
AAGACCGAGG TTCCCCACTC CCGCCAGACC AAGGGGGCGC TGGAAGGAAT CGAATTCAAG
GTGGTCGGCG GCGTCTCCCG CGTTTCCATG AAACTCTTCG GGACCTGCGA ACCCGGGCAG
CCGTTGCGCG GCCCCCAGGG GGTAACGCTC GGCATCGCCA ACTGCCAGGT ACCCAAGCAA
CTGCAGCGCG CGCTCGACAC CACCAAATTC GGCACGCCGG TGCTCTCGGT AACGCCTTAC
CAGGTGAAGG TCAAAGGGAG CACGGTTACC AAAGTGTTGG TGAAGTTACG CGGCAACCCG
GAATTCAGCA CCAGCCGCAA GGGAGACCTG CTCCTTTGGG ATTTCGTAAA CCCGGGTCCT
GTAGCTGCTC CCAAACTCCC TGCCGCACCG CCTGCTCCCA AGGCCAAGGC TCCTGTCGAG
CCCAGGGTCG CCGAGGAACT AAGCCCGCCG CCTGCGCGCA GTAGCGACGA CATGGCGGTT
CAGCTTCCCA GCGACCGCCC GGCCAAGAAG GTCTACACGG GGAGGAGGGT GACCCTCGAG
TTCTCCGACG CCGATGTCAG GAAGATCTTC CAACTGATCG CCGAGGTGAG CAACCTAAAC
TTCCTCATCG CCGATGACGT CACCGGGACC ATCAGCATAA AGCTGGTGAA CGTCCCCTGG
GACCAGGCGC TCGACGTGAT TCTGGATGCC AAGGGGCTCG CCATGATACG CGAGGGGAAC
ATCGTTCAGA TCAAGCCCAG GTCCAAGATG CAGAACCAGG CCGACGAGGA ACTCGCGGCT
AAGAAAGCGG CTGAGCGCCT GATGGAATTG AGGACCACGG TGTTCGAAGT GAACTACGCC
TCGGTGTCCG ACGTGGCGAC CCAGTTCGCC ATGCTAAAGA GCGATCGCGG CGTAATCACC
AAGGACGAGC GCACCAGCCG CGTGATCGTG AAGGATATCC AGACCGCGCT GGACGACATG
AAGGCGCTCC TGAAAACTCT GGACGCCCCC GAGAAGCAGG TGATGATCGA GGCCCGCATC
GTCGAGGCGA CCTCGACCTT CACCCGCGAC CTCGGCGTGC AGTGGGGGCT CAGCTACCGC
GACGGCTCCG CTTCCATGGC TGGCATCAAC TCAGTCGACA CTGGTTTCGG CGGCGTCGTT
TCCGCGGCAG GGCCGGGTGC AACCGGCGCT GGTGGGCTCG GACTCGGCAT GTCCTTCGGC
AAGCTGACCA GCAACATCAA GCTGGACATG AGGCTCGCGG CGGCCGCGAC CATCGGGCAG
GTGAAGATCA TCTCCACCCC GAAAGTGGTC ACCCTGAACA ACAAGGCGGC CAAGATCTCA
CAAGGGCAGT CCATACCGTA CCAGACCACT TCCGCCGAAG GGACCAAGAC CGAGTTCGTG
GAAGCGGCGC TGACCCTTGA GGTGACCCCG CACATAACCG CAGACGGCTC GGTCAGCATG
AAGATCAAGG CCAGCAACAA CTCGCCTGGC ACCGGGTCGC CCCCTCCTAT CAACAAGAAG
GAGGCGACCA CCGAGCTCGT GGTCTCCAAC GGCGACACCA CCGTCATCGG CGGCATCTAC
GTCGACAGCG AGACCGAATC CGATACCGGC GTCCCGTTCC TCTCGGACAT TCCCCTTTTG
GGTTGGCTCT TCAAATCCAA CGCGAAGCAG AAGACGAAGA CGGAACTGCT CATTTTTATT
ACGCCAAAAA TAATTTTATA G
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| Protein sequence | MTRYQCRILC HAVALIVLLT VSAGCVKRMT AANESAQAEA SAFATLRSVT VSADATSVEL
VSDKPITYTS YKGGDPTQII VDISQTEPGA VTSPIEVNRG NIKRIEVERQ PLGGSVLTHM
TLVLTKDVDF AVATDPSDKS RLKIYLPVVE PEAKAEPTEV KEAALAESRI DEKTLTPAAA
TPAVEAGSAP IKAEAVPAPP AAPATESKAA TAAVAEPKAD AAPWKAGGAE GGNGLNAVIP
GADGVDLSIQ GGVQTFNSFK LTKPDRIVLD LFKVKNSLPR NVVPVNAFGI ANARVGSTPD
KVRVVLDAAG ESLPPYEVVK SDLGVKIRLK GKATAIAKAP AVEAPAAAPA PVPAPPAAKL
KTEVPHSRQT KGALEGIEFK VVGGVSRVSM KLFGTCEPGQ PLRGPQGVTL GIANCQVPKQ
LQRALDTTKF GTPVLSVTPY QVKVKGSTVT KVLVKLRGNP EFSTSRKGDL LLWDFVNPGP
VAAPKLPAAP PAPKAKAPVE PRVAEELSPP PARSSDDMAV QLPSDRPAKK VYTGRRVTLE
FSDADVRKIF QLIAEVSNLN FLIADDVTGT ISIKLVNVPW DQALDVILDA KGLAMIREGN
IVQIKPRSKM QNQADEELAA KKAAERLMEL RTTVFEVNYA SVSDVATQFA MLKSDRGVIT
KDERTSRVIV KDIQTALDDM KALLKTLDAP EKQVMIEARI VEATSTFTRD LGVQWGLSYR
DGSASMAGIN SVDTGFGGVV SAAGPGATGA GGLGLGMSFG KLTSNIKLDM RLAAAATIGQ
VKIISTPKVV TLNNKAAKIS QGQSIPYQTT SAEGTKTEFV EAALTLEVTP HITADGSVSM
KIKASNNSPG TGSPPPINKK EATTELVVSN GDTTVIGGIY VDSETESDTG VPFLSDIPLL
GWLFKSNAKQ KTKTELLIFI TPKIIL
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