| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2638 |
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| Symbol | |
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| ID | 8137980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 3075312 |
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| End bp | 3078491 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644870242 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003022432 |
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| Protein GI | 253701243 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.409853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTGT CACGGAGGAA CTTTTTAAAG ATCTCAGGTG TCGGCGTGGC GGCGACCACC
CTGGGCCTGA ACCTCGATCC GGTCGAGGCG AAAGCTCAGG ATCTCGCCAT CCAGCATGCC
AAGGAAACCA CGACCATCTG CCCCTACTGT TCCGTCGGGT GCGGCATGAT CGTGCACACC
CAGGGGGACA AGGTGATCAA CGTCGAAGGG GACCCGGACC ATCCCATCAA CGAAGGGGCC
CTCTGCCCCA AGGGTTCCTC CGTGTACCAA CTGCGCGACA ACAAGGCGCG CATCACCAAG
CCGATGTATC GGGCCGCCGG CGCCGCAACC TGGCAGGAGG TGACCTGGGA ATGGGCGCTC
GACCAGATAG CCAGAAAGAC CAAGGCGACC CGCGACGCCT CCTTCGTCCC CACCAGCAAG
ATAAAGGTCA AGGAGAAGGT CGCCGGGGTT GAGGTCGAGA AGGAGATCGA GGCCGTGGTG
AACCGCACCA TGGGGATCGC CTCGGTCGGC AGCGCCGCGC TGGACAACGA GGAATGCTAC
CTGTACCAAA AATTTTTAAG GGGGTTGGGC CTGGTGTACA TCGAACATCA GGCACGCATT
TGACACAGCG CCACTGTAGC GGCTCTGGCA GAGTCGTTTG GACGCGGTGC GATGACGAAC
CACTGGATAG ATTTCAAGAA CGCCGACGTA ATCCTCATCA TGGGCGCGAA CCCCGCCGAG
AACCACCCGG TCGCCTTCCG CTGGATCTTG AAGGCGAAGG AGTCGGGGGC GAAGGTGATC
TGCGTCGATC CCCGCTTCAC CCGCAGCGCC GCCAAGTCGG ACCTGTACGC GCAGCTTCGC
TCGGGGACCG ATATCGCCTT TCTGGGCGGA ATGATCAACC ACATCATGCA GAACAAGCTC
TACTTCGAGC AGTACGTCGC CGAGTACACC AACGCCTCCT ATCTGGTGAA CGGCGACTTC
AAGCTCCCGG GAGAACTGGA CGGCCTCTTC TCCGGCTACG ACCCGCAAAA GCGGAGCTAC
GACGTTAAAA GCTGGTCCTT CCAGAAGGAG GCCGACGACA GCATCAGGAA GGACCCTACC
CTGCAGGACC CGAACTGCGT GTTCCAGCTC CTGAAGAAGC ACTACAGCCG CTACACCCCG
GAGCTGGTCT CGAAGACCAC GGGGACGCCC AAGGAAAAGC TCCTGGAGGT GTACCAGCTC
TACGCCTCCA CCGGGAGGCC CGACCGCGCC GGCACCTCGC TTTACGCCAT GGGGTGGACC
CAGCACACGG TCGGCACCCA GAACATACGC ACCATGTCCA TCATCCAGCT CCTGTTGGGG
AACATCGGCG TCGCCGGAGG CGGGGTCAAC GCCCTTCGCG GCGAATCGAA CGTGCAGGGA
TCTACCGACC AGGGGCTCTT GTTCCACATC CTCCCCGGTT ACATGCCGGT CCCCTCGGCC
GAGCTCCCCA CCACGGCCGC CTACATCGAG AAGCACACCC CGAAGAGCAA GGACCCGCAG
AGCGCCAACT GGTGGGGGAA CCGCAACAAG TACCTGGTCA GCTACCTGAA GGCGATCTAC
GGCAACAACG CCACCAAGGA GAACGACTTC GGCTACAACT GGCTCCCGAA ACTGGACCCG
GGGATGAACG GCTCCTGGCT GATGATCTTC GACAACATGC TCAAGGGTAA GTTGAAGGGG
TTCTACGCCT GGGGGCAGAA TCCGGCCTGT TCGGGGGCTA ACTCCAACAA GGTGAGAAAC
GCCCTGGCCA AGCTCGACTG GATGGTGGCG GTCAACCTCT TCGACAACGA GACCGCCTCC
TTCTGGAAAG GACCGGGGAT GGACCCGGCC AAGGTGAAGA CCGAGGTCTT CTTCCTTCCG
GCGGCGGCAT CCTTCGAGAA GGAAGGCTCC ATCACCAACT CCGGGCGCTG GGCCCAGTGG
CGCTATCAGG CGGTGAAGCC CCTCGGGCAG AGCAAGCCCG ACGCCGAGAT CATGAACGAC
CTGTACCAGG CGATCAAGGG GCTCTACGCG AAAGAAGGAG GCGCGCTCCC CGAACAGCTC
TTGAAGCTGA CCTGGAACTA CGGCTTCAAA AGGGCCGACG GCAGCATCCG CTCCATCGAC
ATCCACCAGG TGGCCAAGGA GATCAACGGC TACTTCCTCC AGGACGTATC CGAGCCCGTG
AAGCCGCTAA AGCCCGGGCA AGCGCCGCCG AAACCGCGGG AGCCCTGGGA GGCGAAGAAG
CTTTTAGGCA AGAAGGGAGA ACTGGTGGGA GGTTTCGCCC AGCTTCAGGC CGACGGGAGC
ACCTCCTGCG GCTCGTGGAT CTTCAGCCAG AGCTACAACG AAAAGGGGAA CATGATGGCA
CGCCGCGGCA AGAAGGACCC GACCGGCCTC GGCATGTTCC CCGAGTGGAG CTGGTGCTGG
CCGGTGAACC GCCGCATCAT CTACAACCGC GCCTCGTGCG ACCCAAGCGG CAAACCGTTC
AACGTGAAAA AGGCGGTGGT CTACTGGAAC CCCCTGGCGG TGCAGCCCGG CGGCAAAATG
GGGGCCTGGG TGGGCGATGT CCCCGACGGC CCCTGGCCGC CTCTCGCCGC CGGAGCGGAG
GGGCGCAAAC CCTTCATCAT GAGGGCGGAC GGGGTGGCCG CGATCTTCGG CCCGGGGCTT
AAGGACGGCC CCTTCCCCGA GCACTACGAG CCGATGGAGT CGCCGCTGGC CCAGAACCTG
ATGTCCAAGC AGCTCAACAA CCCCGCCGTG AAGATCTTCA AGGACCCCGC GGTGAAGGAG
GACGTCTTGG CCAGCGCCGA CCCGCGCTTT CCGCTGGTCG CCACCACCTA CCGGGTCACC
GAGCACTGGC AGACCGGCGT CATGACCCGC AACACCCCTT GGCTATTGGA ACTGCAACCG
CGCCAGTTCT GCGAGATCAG CCAGGAGCTT GCCAAGGAGA AGGGAATCGC CAACGGCGAC
CTGGTGGAGG TAGCCTCGGC CCGCGGCAAG GTCGAGGCGG TGGCCATGGT GACCGTGCGC
ATGAAGCCGA TGAAGATAGG GGACAAGGTC GTGCACCAGA TCGGCCTCCC CTGGTGCTTT
GGCTGGCACA CCCCCGGCGT GGGAGACGCC GCCAACCTGC TGACCCCCAC CGCGGGGGAC
GCCAATACGA TGATTCCCGA GACCAAGGCG TTCATGGCCG GGATCGCGAG AAAGGGGTGA
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| Protein sequence | MEVSRRNFLK ISGVGVAATT LGLNLDPVEA KAQDLAIQHA KETTTICPYC SVGCGMIVHT
QGDKVINVEG DPDHPINEGA LCPKGSSVYQ LRDNKARITK PMYRAAGAAT WQEVTWEWAL
DQIARKTKAT RDASFVPTSK IKVKEKVAGV EVEKEIEAVV NRTMGIASVG SAALDNEECY
LYQKFLRGLG LVYIEHQARI UHSATVAALA ESFGRGAMTN HWIDFKNADV ILIMGANPAE
NHPVAFRWIL KAKESGAKVI CVDPRFTRSA AKSDLYAQLR SGTDIAFLGG MINHIMQNKL
YFEQYVAEYT NASYLVNGDF KLPGELDGLF SGYDPQKRSY DVKSWSFQKE ADDSIRKDPT
LQDPNCVFQL LKKHYSRYTP ELVSKTTGTP KEKLLEVYQL YASTGRPDRA GTSLYAMGWT
QHTVGTQNIR TMSIIQLLLG NIGVAGGGVN ALRGESNVQG STDQGLLFHI LPGYMPVPSA
ELPTTAAYIE KHTPKSKDPQ SANWWGNRNK YLVSYLKAIY GNNATKENDF GYNWLPKLDP
GMNGSWLMIF DNMLKGKLKG FYAWGQNPAC SGANSNKVRN ALAKLDWMVA VNLFDNETAS
FWKGPGMDPA KVKTEVFFLP AAASFEKEGS ITNSGRWAQW RYQAVKPLGQ SKPDAEIMND
LYQAIKGLYA KEGGALPEQL LKLTWNYGFK RADGSIRSID IHQVAKEING YFLQDVSEPV
KPLKPGQAPP KPREPWEAKK LLGKKGELVG GFAQLQADGS TSCGSWIFSQ SYNEKGNMMA
RRGKKDPTGL GMFPEWSWCW PVNRRIIYNR ASCDPSGKPF NVKKAVVYWN PLAVQPGGKM
GAWVGDVPDG PWPPLAAGAE GRKPFIMRAD GVAAIFGPGL KDGPFPEHYE PMESPLAQNL
MSKQLNNPAV KIFKDPAVKE DVLASADPRF PLVATTYRVT EHWQTGVMTR NTPWLLELQP
RQFCEISQEL AKEKGIANGD LVEVASARGK VEAVAMVTVR MKPMKIGDKV VHQIGLPWCF
GWHTPGVGDA ANLLTPTAGD ANTMIPETKA FMAGIARKG
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