Gene GM21_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2607 
Symbol 
ID8137949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3043091 
End bp3043606 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID644870213 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 
Protein accessionYP_003022403 
Protein GI253701214 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones124 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA GACTGAAAAA GATCAAGCTC CTGATACTCG ACGTCGACGG CGTAATGACC 
GACGGCCGCA TCATCTTCGA CTCCAACGGG GTGGAGAGCA AGTTCTTCAA CGTGAAGGAC
GGCCACGGCA TCAAGATGCT GCAGCGCTCC GGTATCGAGG TGGGGATCAT CTCCGGCCGC
GAATCCCAGG TGGTCTACAA CCGAGCCGTC GAACTCGGCA TCGGCCAGGT CTACCAGAAG
TCGCTTGACA AACTGGTCCC TTACCGCCAG ATGCTGGAGG CGACCGGTCT CACCGACGAA
CAGGTCGCCT TCATGGGGGA CGACGTCATC GACATCCCGC TGTTGAAAAG GGTGGGATTT
GCCGCCGCCC CCGCGGACGC AGTCGACGAG GTCATTCCCT TCGCGCAATT CGTCGCCAAG
AACAAAGGTG GCTGGGGTGC CGTGCGTGAA GTTTGCGACC TCATCCTAAA GGCCCAGGGG
AACTGGGAGA CGGTCACCTC CAGGTACTAC GTGTAG
 
Protein sequence
MEERLKKIKL LILDVDGVMT DGRIIFDSNG VESKFFNVKD GHGIKMLQRS GIEVGIISGR 
ESQVVYNRAV ELGIGQVYQK SLDKLVPYRQ MLEATGLTDE QVAFMGDDVI DIPLLKRVGF
AAAPADAVDE VIPFAQFVAK NKGGWGAVRE VCDLILKAQG NWETVTSRYY V