| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2540 |
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| Symbol | |
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| ID | 8137882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2969967 |
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| End bp | 2972003 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644870149 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_003022339 |
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| Protein GI | 253701150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000000000573314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACAG TGACACGCGA CTTCCATTTC GACGGGCACG ACGAGAAGAC CAAGACGCGG
CAGCTCCTGG AGCAGGAGTG GCTCCTCACC AACGGCTTGG GAGGCTACGC CTCCGGCACC
GTCTGCGGCG CCCTCACCCG CCGCTACCAC GGGCTTCTCA TCGCGGCCTT TCCCTCGCCG
CTTGGGCGCA TGGTGATGCT GAACCGGCTC ACCGAATCGA TCCGCTTCCC CGACGGGAGC
ACGGTCCGCT TCGGCGGGGA CCAGAGGGAG GGAGGGCTCG ATTTCGAGGG GATCGAGCAC
CTGACCGGGT TCCGCCTGGA AGACGGGCTC CCGGTCTGGC GCTACGAGGT CATGGGGAGC
GTGATCGAGA AGCAGCTGGT GATGGTGCAC AAGCAAAACA CGGTGCACCT GATCTACCGG
CTCCTCTCGG GCGAGCAGAA GGTGAGGCTC AAACTGCACC CCTACCTGCA GTTCCGCCCG
CACGACGCCT CGGTGGACCA GCTGGCCGAC GACCCGTACA TGTTCACCGC TGTGCAAAAC
CGCTACCAGA TCTCCACCGG GAGCCATGCG CCGCAGCTAA GGCTCGTGAT CAACGGGGGA
CGCGGCAACT TCACCCTGGA GGAGAAGCAG AATACCGACA TCTTCTACGA CTTGGAAAAC
GCCCGCGGCT ACGACGCCCT GGGAACGCTC TGGACCGCGG GCTACTTCGC GGTCGACCTG
GGACTGGATC AGGAGGCGGC GCTGACCGCC TCCACGGAAA CCTGGGAGAC GCTCGCCGCC
CTCCCCCCCG AGGCGGCGCT CGCCATGGAG CGGGAGCGGC GCCGGCTCAT CCTGGCCGCG
GCGGACCCGA AAGCCCGCCA GGGGCTCGCG GCCGAGCTCG TCCTCGCCAC GGACCAGTTC
ATCATCACCC CGGCCGGCAG GCACAAGGAC AGCGTGCGCG CCCACGCCAT GGGGGACGAG
GTCTGCACCG TGATCGCAGG CTACCACTGG TTCACCGACT GGGGACGCGA CACCATGATC
TCGCTGGAGG GGCTCACCCT GGCCACCGGG CGCCACATGG AGGCGGGATG GATCCTCAGG
ACCTTCGCCC ACTACGTGAG AAACGGGCTG ATACCGAACC TCTTCCCGGA GGGGCAAAAC
GACGGGCTCT ACCACACCGC CGACGCGAGC CTCTGGTTCT TCCACGCCGT CAACCGCTAC
CTAAGCCACA CCGGCGACGA CGCGACCCTG CAGATGATCA TGCCCCAACT GCGGCAGATC
ATCGACAAGC ATCTCTCAGG CACCAGCTTC GGCATCAAGG TGGACCCAAG CGACGGGCTC
CTCACGCAGG GGGCCGAGGG ATACCAGCTT ACCTGGATGG ACGCGAAGGT CGGCGACTGG
GTGGTGACCC CGCGCCGGGG AAAGGCGGTG GAGCTGAACG CCCTTTGGTA CAACGCGCTC
AGGCTGATGC AGCAGTGGAC CGAGCAAAAC GACTCCGCGT ACTCGCGCCA GTTGGGCTCT
TTTGCCGAAC AGACCTGCCG CTCCTTCAAC AGCCGTTTCT GGTACCCCGA CGGCGGCTAC
CTCTACGACC TGGTGGACGG CGAGTTGGGG GACGACAACG CCTGCCGCCC CAACCAGCTC
TTCGCCATCT CGCTCGACCA CTCGGTGCTG GAGCGGGACA AGTGGTCCGC TGTGCTGGAG
ACGGTGAGAA AGCGGCTGCT CACCCCGGTC GGGCTGCGCA CGCTCGCCCC GGGCCACCCC
GACTACAAGC CGACCTACCA CGGCGACCTG AGAGCCCGCG ACGCGGCCTA CCACCAGGGG
ACCGTCTGGC CTTGGCTCAT CGGTACCTTC GTCGACTCCT GGCTTAAGCT CTATCCCGAC
CAGGTTCCGA CCGCGCACAG CTTCCTGGAC GGGCTGGCGC GCCAGATGAA CCACCAGTGC
ATAGGCTCCA TCAGCGAGAT CTTCGACGCC GAAAAGCCCT ACCTCCCCAA GGGGTGCATC
GCCCAGGCCT GGAGCGTCGC GGAGATGCTC AGGTGCTGGC TGAAGACGGC GCCCTGA
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| Protein sequence | MTTVTRDFHF DGHDEKTKTR QLLEQEWLLT NGLGGYASGT VCGALTRRYH GLLIAAFPSP
LGRMVMLNRL TESIRFPDGS TVRFGGDQRE GGLDFEGIEH LTGFRLEDGL PVWRYEVMGS
VIEKQLVMVH KQNTVHLIYR LLSGEQKVRL KLHPYLQFRP HDASVDQLAD DPYMFTAVQN
RYQISTGSHA PQLRLVINGG RGNFTLEEKQ NTDIFYDLEN ARGYDALGTL WTAGYFAVDL
GLDQEAALTA STETWETLAA LPPEAALAME RERRRLILAA ADPKARQGLA AELVLATDQF
IITPAGRHKD SVRAHAMGDE VCTVIAGYHW FTDWGRDTMI SLEGLTLATG RHMEAGWILR
TFAHYVRNGL IPNLFPEGQN DGLYHTADAS LWFFHAVNRY LSHTGDDATL QMIMPQLRQI
IDKHLSGTSF GIKVDPSDGL LTQGAEGYQL TWMDAKVGDW VVTPRRGKAV ELNALWYNAL
RLMQQWTEQN DSAYSRQLGS FAEQTCRSFN SRFWYPDGGY LYDLVDGELG DDNACRPNQL
FAISLDHSVL ERDKWSAVLE TVRKRLLTPV GLRTLAPGHP DYKPTYHGDL RARDAAYHQG
TVWPWLIGTF VDSWLKLYPD QVPTAHSFLD GLARQMNHQC IGSISEIFDA EKPYLPKGCI
AQAWSVAEML RCWLKTAP
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