Gene GM21_2539 details

Gene Information

• Locus tag: GM21_2539
• ID: 8137881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 2968090
• End bp: 2969970
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644870148
• Product: malto-oligosyltrehalose trehalohydrolase
• Protein accession: YP_003022338
• Protein GI: 253701149
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR02402] malto-oligosyltrehalose trehalohydrolase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.0000000367182
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCTGCGC TGCAAAGACG GCTACCGATA GGAGCGGAGG TTTTCCCGGA AGGTGTCCAC 
TTCCGTGTTT GGGCCCCGGC GCACCGGAAG GTGGAGGTGG TGCTGGAGGG AGGGGCGGGC 
CAGGGGAGTT CCCTGGAGCT GGCATCGGAG GAGGAGGGGT TTTTCGCCGG ACTAAGCCGC 
GAGGCGCGGA CGGGGTCGTT GTACCGCTTC CGGCTGGACG AGGCCGAGCA CCTCCACCCG 
GACCCCGCCT CGCGCTTCCA GCCCGACGGC CCCCACGGCC CCTCACGGGT GGTCGACCCC 
TCCCAATACC GGTGGAGCGA CGGCCAATGG CCCGGGATCG TGCGCGAGGG GCACGTGATC 
TACGAGATGC ACCTGGGGAC CTACACCCGG GAAGGGAGTT GGCGCGCCGC GGCGGACCAG 
CTCCAGGAAC TGAAGGAGTT GGGGATCACC CTGGTAGAAG TGATGCCGGT GGCGGATTTC 
CCCGGCAGGT TCGGCTGGGG GTACGACGGG GTGAACCACT TCGCCCCCGC GAGGCTCTAC 
GGCGAGCCGG ACGACATGCG CAGCTTCGTG GATCAAGCCC ACCGCCTTGG GCTTGGGGTG 
TTGCTGGACG TGGTCTACAA CCACTTCGGC CCGGAAGGGA ACTACCTGGC CCAGTTCTCC 
CAGTACTACT ACGCGGAGGA GGAAGGCGAA TGGGGCAAGG CGATGAACTT CGACGGCAGG 
CGCAGCCGCC CGGTAAGGGA GTTCTTCGCC GGCAACGCCG CCTACTGGAT CGAGGAGTTC 
CACCTGGACG GCCTGCGCTT CGACGCCACC CACGCCATTC GCGACGACTC CCCCATCCAT 
GTCCTGGGCG AGATCACCGA AAAGGCGCGG GCAGCCGCCG GAAAACGCAC CATCTTGTTG 
GTGGCCGAGA ACGAGTACCA GGACGTCCGC TGCCTGCGCG ACAAGGAAGC CGGCGGCTTC 
GGCATGGACG CGGTCTGGAA CGACGACTTC CACCACAGCG CCTACGTGGC GCTCACCGGC 
TATCACGACG CCTACTATTC GGAATACTTC GGCTCCCCCC AGGAGCTGGT CTCGGCTGCC 
AAGTGGGGCT ACCTGTACCA GGGGCAGTTC TACTTCTGGC AGGGGAAAAG GCGCGGCTCC 
CCAACCATCG GCGTGAGCCC CTCCTGCTTC GTCAACTACA TCCAAAACCA CGACCAGATC 
GGCAACTCCG CCTGGGGGAT GAGGATCGAC AGGCTCACCA ACCCGGCGGC CCTCAGGACC 
ATGACGGCGC TGCTGATGCT CGCCCCGCAG ACCCCGATGA TCTTCCAGGG GCAGGAGTTT 
TCCGCGAGCT CCCCTTTTCT CTATTTCGCG GACCTGAGCC CGGAGATCTC GCAGGCGGTG 
CACACCGGCC GCATCGAGTA CCTGAAGCAG TTCACCAACA TAGACGCCCC GGAAATCATC 
GACTCCATAG ATAAACCGTA CGAGCTGGAA ACCTTCGAGC AGTCGCGGCT TCGCTTAAGC 
GAGCGCGAGC GGAATGCCAA GACCTACGCG CTCTACCGCG ACCTGATCCG GCTGCGGCGC 
GAGGACCCGG TCTTCAGCCG CGCCTACGCC TGCCACATAG AGGGGGCGGT GCTGGGGGCG 
AGCGCGTTTT TACTCCGCTA TTTCCTGGAG GGTGACCAGC GCCTGCTCCT GATCAATCTG 
GGGCGCGAGC TGCATCTGGT GCCCATCCCG GAGCCTATGC TGGCGCCGCC TGAGGGATGC 
GACTGGGAGA TCCTCTGGAC CAGCGAGAAG CTGGAATTCG GCGGCTCGGG AACGCCCAAG 
CTCGACACGG AGAAGTTCTG GCGCGTACAG GGGAACGCGG CGGTGGTGCT GATTCCGGTC 
CGCCAGGGAG AAGAGCCATG A 

 

Protein sequence

MAALQRRLPI GAEVFPEGVH FRVWAPAHRK VEVVLEGGAG QGSSLELASE EEGFFAGLSR 
EARTGSLYRF RLDEAEHLHP DPASRFQPDG PHGPSRVVDP SQYRWSDGQW PGIVREGHVI 
YEMHLGTYTR EGSWRAAADQ LQELKELGIT LVEVMPVADF PGRFGWGYDG VNHFAPARLY 
GEPDDMRSFV DQAHRLGLGV LLDVVYNHFG PEGNYLAQFS QYYYAEEEGE WGKAMNFDGR 
RSRPVREFFA GNAAYWIEEF HLDGLRFDAT HAIRDDSPIH VLGEITEKAR AAAGKRTILL 
VAENEYQDVR CLRDKEAGGF GMDAVWNDDF HHSAYVALTG YHDAYYSEYF GSPQELVSAA 
KWGYLYQGQF YFWQGKRRGS PTIGVSPSCF VNYIQNHDQI GNSAWGMRID RLTNPAALRT 
MTALLMLAPQ TPMIFQGQEF SASSPFLYFA DLSPEISQAV HTGRIEYLKQ FTNIDAPEII 
DSIDKPYELE TFEQSRLRLS ERERNAKTYA LYRDLIRLRR EDPVFSRAYA CHIEGAVLGA 
SAFLLRYFLE GDQRLLLINL GRELHLVPIP EPMLAPPEGC DWEILWTSEK LEFGGSGTPK 
LDTEKFWRVQ GNAAVVLIPV RQGEEP