| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2521 |
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| Symbol | |
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| ID | 8137863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2948183 |
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| End bp | 2949898 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644870130 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003022320 |
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| Protein GI | 253701131 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.0595753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGG ACACCAACGA GGGCGATAAC CTGTACCGCT ACATCGTCGA CATGATTCCG
CAGATCGTCT GGACGGCTAC GCCCGACGGA CAACAGGATT TTGCCAACCT CCGGTGGTAC
GAGTTCAACG GACTTACGCC GGGGGAGCCG GATCCCGAAC CATGGCGCAG CATCATCCAT
CCGGACGACG TGGCCATGAC CGCCGAGAAA TGGCAGCATT CGCTGGCGAC CGGGGAACCT
TACTACTGCC TGCACCGAAA CAAAAGGCAC GACGGCGAGT ACCGCTGGAT GCTGTCGCGG
GCACTGGCCC AAAAGGACGA TGAGGGGCGG GTGGTACGCT GGATCGGCAG CGGAACCGAC
ATCACGGAGC AGAAGATCGC CGAGGCGGAG CTGATACGGT ACCGCGACCA TCTGGAGGAA
CTGGTCCGGG AGCGGACGGC TGAACTTGTG CGGGCCAAGG AGACGGCCGA GATTGCGGCC
CGGGCCGTTC AGGAAGCCAA CGAACTGCTG GAAAAGCGGG TGGAGGAGCG GACCGAGGAA
CTGAGGAAGA CCGAAAAGGA GCTGCGCCAG GCACAGAAGA TGGAGGCTGT CGGGACGCTT
GCGGCAGGTA TCGCGCATGA CTTCAACAAC ATCCTCACCT CCATCCTCGG GTTCACCGAC
ATGGTCCTGC ACAAGATTCC GGAGGGAGAA ATGGGGCGGC GGGAGATGGA ACAGGTGTTC
GTCTCGGCGC AGCGAGCCGC GGATCTCGTG CGCCAGATCC TCAGCTTCAG CAGGAGAAAC
GATCAGGAAA GGCAGCCGGT GCATGTCTCC GGCATCATCG AAGACACCTG CAAACTGCTG
CGTTCCTCGC TTCCTGCCAC AGTGGAGTTC GTCACTGAAT TTTTCGTTTC CGAGGATGAT
GACAAGGTCC TGGCCGACCC GATACAACTG CACCAGGTGC TGATGAATCT CTGCACCAAC
GCAGCCCACG CCATGCAGCC CGACGGCGGG ACGCTGACCA TCACCCTGAC CGCGGCGGAG
GCAGGGTCGC CGGGGCTTAC CTCTCTTCCT GTCCTTACTT CGCGGGACTA CATCAGGGTC
GCCGTGAGCG ACACCGGTCG CGGCATTGAG CCGTTGGTGC TGGAGAGGAT CTTCGATCCC
TATTTCACCA CCAAGCCTGC GGGGGAGGGG ACGGGGCTCG GTCTTGCCGT GGTGCAGGGG
ATCGTGAAGA ATCACGGCGG CGCCATCACG GTTCACAGCG AGCCGGGAAA GGGAACCTGT
TTCGAGGTCT TCCTCCCCAC CGTGATAAGC GACGTGCTCG AGGAGGTACA GGTTCGCGAG
CAGCTTCTGC ATGGTTCCGA ACGCGTCCTG TTCGTCGACG ACGAGGAATC GCTCACCGTC
CTCGGCAAGG GGATTCTGGA GGACCTCGGC TACAACGTGG TCACCAGTAA CAGCAGCCGC
AGGGCCATGG AGATGTTCCG TGCCGACCCG GCCCTCTTCG ACCTGGTGAT TACCGACCTG
ACCATGCCGG GATTGACGGG TAAGGCCATC GCCAAAGAGA TCCACGCGCT GAGACCTGAC
ATCCCAATCA TTCTTTGCAC CGGGTACACG GAGAGCTTTG ACGAGAAGGA CCGGGAATAC
GGCATTCGCG CCTGCCTTAT GAAGCCTTAC ACCTCGAAAA TGCTGGGGCG GACCATACGG
ATGGTGCTGG AAGGGAAGAC GACATCAACC TGCTGA
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| Protein sequence | MNLDTNEGDN LYRYIVDMIP QIVWTATPDG QQDFANLRWY EFNGLTPGEP DPEPWRSIIH
PDDVAMTAEK WQHSLATGEP YYCLHRNKRH DGEYRWMLSR ALAQKDDEGR VVRWIGSGTD
ITEQKIAEAE LIRYRDHLEE LVRERTAELV RAKETAEIAA RAVQEANELL EKRVEERTEE
LRKTEKELRQ AQKMEAVGTL AAGIAHDFNN ILTSILGFTD MVLHKIPEGE MGRREMEQVF
VSAQRAADLV RQILSFSRRN DQERQPVHVS GIIEDTCKLL RSSLPATVEF VTEFFVSEDD
DKVLADPIQL HQVLMNLCTN AAHAMQPDGG TLTITLTAAE AGSPGLTSLP VLTSRDYIRV
AVSDTGRGIE PLVLERIFDP YFTTKPAGEG TGLGLAVVQG IVKNHGGAIT VHSEPGKGTC
FEVFLPTVIS DVLEEVQVRE QLLHGSERVL FVDDEESLTV LGKGILEDLG YNVVTSNSSR
RAMEMFRADP ALFDLVITDL TMPGLTGKAI AKEIHALRPD IPIILCTGYT ESFDEKDREY
GIRACLMKPY TSKMLGRTIR MVLEGKTTST C
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