| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2495 |
|---|
| Symbol | |
|---|
| ID | 8137836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2918840 |
|---|
| End bp | 2921449 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644870104 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_003022295 |
|---|
| Protein GI | 253701106 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 87 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TGACGCCCAT GATGCGGCAA TTCCTTGAGA TCAAGGCCGA ACACCCCGAC
GCGATCCTTT TCTTCAGATG CGGCGACTTC TACGAGATGT TCCTGGACGA CGCGGTCAAA
GCCTCCCGCA TCCTCGGCAT CACCCTCACC TCGCGCAACA AGAACGCCGA CGGCTCCGAG
GTTCCTCTCT GCGGCATCCC CTACCACTCC TGCGCCCCAT ACATCGCGAA ACTGGTCGAG
GCAGGGGAGA AGGTCGCCAT CTGCGAACAG GCCGAGGACC CGAAGCAGGC CAAGGGAATC
GTCAAGCGCG AGGTGGTGAA GGTGATCACC CCAGGGCTCG TTATCGAGGA CGCCTCGCTC
TCCCCCAAGG AAAACAATTA CCTGCTGGCG CTTTGCTGTG ACGGCGAGTG CTACGGGCTC
TCCTACCTCG ACCTCTCCAC CGGAGAATTC AGAGTGACCG AGCTGGATGG GCTCCAAGCC
GCCCTGGCAG AGGTGACCTG CATAGGTCCC CGCGAAATCA TCCTCCCGGT CTGCTTCCGT
GAGGAACCGA AGCGGAAAGA AGTCGCCCAC GTCATCGTGG ACCGCAGCAT CACCTATTTC
GAGGAATGGG TCTACGACCC GGACTACTGC AAGCGACTGG TAGCGAACCA GTTCAAGGGG
GCGACTGCCG AGTCGCTTGG ATGCGACCGC CTCCCCACCG CCCTTCTTGC CGCAGGCGCG
GTATTGCACT ACCTGGTGGA CACGCAAAAG GGGCACGCCC CCCATGTAAC CTGCATCACT
CCGTACAACG AAAGCGAGCA TCTCCTCCTC GACGAATCGA CCAGGAGGAA CCTGGAACTC
ACCGCTACCC TCTCGGAAGG AAAGCGCAAG GGGTCGCTTC TGGGGCTTAT GGACCGCACC
GTCACCGCCA TGGGAGGCCG CAAGCTCAAG CAGTGGATCA ACTACCCGCT CATGGATCTG
AAGAAGATCT GGCTGCGGCA GGACGCGATC CAGGAACTGA TGGAGGCGCC CGGCACCCGT
GAAGCGATGA AGTCGCTCCT GGCCGGGGTC TACGACCTCG AACGCCTGAA CGGCCGCATC
AGTCTCGCCT CCGCCTCCGC CAAGGATCTC TCCGCCCTCA GGTCGTCGCT CAGCCGTCTT
CCCGCCATCA AGGAGCAGGT AGCCGCCTGC GGCGCAGGGC TGCTCAAGGA GTTGGATGCC
GGCATCGACC CGCTCGACGA ACTGAGCGAC CTGATCTCCA GCGCCATCGT TGACGACCCT
CCTTTTGTAT TGCGCGACGG CGGCATCATC GCGGACGGCT ACAACCAGGA ACTCGACGAA
TTACGGGCCA TCAGCCGCGA GGGAAAGGGG TTCATCGCCA GGCTGGAGGC ACAGGAGAAG
GGGCGGACCG GGATCTCGTC GCTCAAGATC CGCTACAACA AGGTCTTCGG CTACTACATC
GAGGTGACCA AGGCGAACGT CTCGGCCATC CCCGACGACT ACATCAGAAG ACAGACCCTC
GCCAACGCCG AGCGGTACAT CACCCCCGAA CTGAAGGAGT ACGAGGAGAA GGTGCTCGGG
GCCGAGGACC GGATCAAGGA CCTGGAATTC TCGCTCTTCC AGGAAGTCCG AGAGGCAGCC
GCGGCTCAAG GGGAGCGGAT CGCCCGCAGC GCCGACCGGC TCGCCTGCCT GGACGTCCTG
GTAAGCCTCT CCGAACTGGC CCACGACAAG GGGTACTGCC GACCCGAGGT GCACGAGGGG
AGCGAACTCA GCATCACCGA GGGGAGGCAC CCGGTCATCG AGGACATGCA CTCCGCCGAG
CGCTTCGTCC CCAACGACAC GCTGCTGGAC AACGGGGAGA ACCAGCTCAT CATCATCACC
GGCCCCAACA TGGCCGGTAA ATCGACCTTC ATGCGCCAGG TGGCCCTCAT CTCGCTGATG
GCCCAGATGG GGAGCTTCGT GCCGGCGGAC AAGGCGCTCA TTCCGCTTGT TGACCGCATC
TTCACCAGGG TGGGCGCATC CGACAACCTG GCCCGCGGCC ACTCCACCTT CATGGTCGAG
ATGATGGAGA GCGCCGCCAT CCTGAGGGGA GCCACCGCCA GGAGCCTGGT CATCCTGGAC
GAGATCGGGC GCGGCACCTC CACCTTCGAC GGCGTCTCCA TCGCCTGGGC GGTCGCGGAA
TTCCTGCACG ACAACAAGAT ACACGCGGCC AAGACCCTCT TCGCCACCCA CTACCACGAA
CTCACCGAAC TCGCGGTCAC CCGCCCCGGC ATCAAGAACT TCAACATAGC CGTCAGGGAA
TGGAACGAGC GCATCATCTT CTTGAGGAAG ATCGTTCCCG GTGGGGCCTC ACACTCCTAC
GGCATCCAGG TAGCCCGCTT GGCCGGTCTC CCCCAGGCGG TGATCGACCG GGCCAAGGAG
ATCTTGATCA ACCTGGAAAA GGGGGAGTAC GGCGAAGGAG GGGTACCGCG CCTGGCGCGC
GGCAAGAAGA CCCCTCCCCC GTCACCGCAG CTCTCGCTCT TTGGCGCGGG CGACGACCAG
ATCAGGGAGA GGCTCAAGGA AATCGAAGTG GCGCTCCTGA CCCCCCTGGA GGCGCTGAAC
CTCGTGGACG AACTGAAGAG GATGATCTAG
|
|---|
| Protein sequence | MSEMTPMMRQ FLEIKAEHPD AILFFRCGDF YEMFLDDAVK ASRILGITLT SRNKNADGSE
VPLCGIPYHS CAPYIAKLVE AGEKVAICEQ AEDPKQAKGI VKREVVKVIT PGLVIEDASL
SPKENNYLLA LCCDGECYGL SYLDLSTGEF RVTELDGLQA ALAEVTCIGP REIILPVCFR
EEPKRKEVAH VIVDRSITYF EEWVYDPDYC KRLVANQFKG ATAESLGCDR LPTALLAAGA
VLHYLVDTQK GHAPHVTCIT PYNESEHLLL DESTRRNLEL TATLSEGKRK GSLLGLMDRT
VTAMGGRKLK QWINYPLMDL KKIWLRQDAI QELMEAPGTR EAMKSLLAGV YDLERLNGRI
SLASASAKDL SALRSSLSRL PAIKEQVAAC GAGLLKELDA GIDPLDELSD LISSAIVDDP
PFVLRDGGII ADGYNQELDE LRAISREGKG FIARLEAQEK GRTGISSLKI RYNKVFGYYI
EVTKANVSAI PDDYIRRQTL ANAERYITPE LKEYEEKVLG AEDRIKDLEF SLFQEVREAA
AAQGERIARS ADRLACLDVL VSLSELAHDK GYCRPEVHEG SELSITEGRH PVIEDMHSAE
RFVPNDTLLD NGENQLIIIT GPNMAGKSTF MRQVALISLM AQMGSFVPAD KALIPLVDRI
FTRVGASDNL ARGHSTFMVE MMESAAILRG ATARSLVILD EIGRGTSTFD GVSIAWAVAE
FLHDNKIHAA KTLFATHYHE LTELAVTRPG IKNFNIAVRE WNERIIFLRK IVPGGASHSY
GIQVARLAGL PQAVIDRAKE ILINLEKGEY GEGGVPRLAR GKKTPPPSPQ LSLFGAGDDQ
IRERLKEIEV ALLTPLEALN LVDELKRMI
|
|---|
| |