| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2480 |
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| Symbol | |
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| ID | 8137821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2900558 |
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| End bp | 2903206 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644870090 |
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| Product | PEP-CTERM system TPR-repeat lipoprotein |
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| Protein accession | YP_003022281 |
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| Protein GI | 253701092 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 115 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA AGTTCTGTCT CGTGTTGGTC ATCTTGCTCA TCTGCTTTGG ATGCAGCAGT
AAGACGAAAG AGTCTCTTTA TAACGAAGGA AAGCAACAGA TGGAGGCCTC TAATCCTGGT
GCTGCCGTCG TCTTCTTCAA GAACGCGCTG GAAAAGGATG GAAATTATCT GGAGGCACGT
TTCCAATTGG CCAAGGCATA TGCCGCCCTT GGCAAGAACG AGCAGGCGGA AAAGGAATTC
ACCAAAGTTC TGACCCAGAA CCCGACCAAG GACGAGGTGC TACTGGAATT GGCTAAGCTG
AGCAATGCTG CGGGTAAAGG TGACCAAGGT TTCAGATATG CCACGCAATA CATCGCAAAA
CATCCAGGGA CGGTTGATGG TCTCGAGGCT GCGGGGATTT CCTATCTGGT CCGGAAAAAG
TACCAGGAAG CCCGGAATTA CCTGACTCAG GCTCTCAGCG TCGATCCTTC CCGCAGTGCC
ACAAAGCTGG AGCTTGCGTC GGTAGATATG GCCACAGGTG ATACTGAGAG TGCCAAGGCT
CTACTGAACG AGGTGATCCT GGCGGAGCAG AAAAATTTCA AGGCGCTCTA CATGCTGGCA
GCCATAGAGA ACAGTTCGGG CCACGGCGAT AAGGCCGCCG CTCTGTATCA AAAAATATTG
CAGCTGGATC AGAATCAGGT CAATGCTTTG TACAAACTGG GGCTGCTGTA TTTGGAAAAG
GGTGAGGTGG ACAAGGCCGA TCAAAGTGCC GACCAGATGA TCAAGGCTTT CCCCAAAAGA
GGTGATGGTC ACCGCCTCAA AGGGCTGGCC GCCTTTTACC GCAAAAGATT CGACGACGCC
ATAACCTCGC TGCAGCAGTC TGTGAAGCTC TCCCCGACTC TTGAGGCATA TCATTTCCTG
GGACTTAGCT ACTACAGCAA GGGCGAGTTG GAGAATGCCC TGAGCCAGTT CCGCGTGGTG
CTGGACCGGG TGCCCGAAGC TCGGAAGTCG AGGCTCATGA CCGCGCAGAC CCTATTGGCG
CAAAAGCGGA CTGAGGACGG CATCGCCGAG ATCAAGAAGG TTTTGGCCTC CGACGACAAC
GACGCTGTGG CCCACAACCT CCTGGGAGGG GCCTACATGT CACATGGGCT CTTCGAGGAG
GGGATGCGCG AGCTGAACCT GGCCACAAAG CTTGATCCCA AGATGGTCAA CGCCCACCTC
AAGAAGGGCG CCTTTTATTT CAGCAAGGGG AGGTATGCCG AAGGAGAGAC AGAACTTGCC
ACCGCCGTTC AAGCCGCTCC CGACGCCCAA AACAGCCGGC TTTTGCTTGC CTCCTACTAC
CAGAGCCAAA AAAAGCCGGC GAAGGCGCTC TCGACGCTTA AGTCCGGACT CAAAGGGGGC
AAAGGCGATG TCCCGCTTTA CAACGCCATC GCTTCGCTGC AGCTCTCCGC GGGAAACAAG
GCGGAAGGGA TCAAGACTCT GGAGCAGGCC AAGCGCCTTG ACCCAGGCTT TGCGGCGACC
TACCAGAACC TTGCCGGGGT TCACGCCGCA ACCGGTGATT ATCCCCGCGC TATGGCGGAA
CTTAACCAAT TGCTGACCAG GGATGCCGGC AACCTGCGCG CCCTGCTCGG CCTGGCCGCC
CTGAGCGAAA TCAGCGGCAA AGAGACGGAC GCAGTCGCGT ATTACCAGAA AGCTACCCAG
ACAAAGGCCC CGGAAGCGTT CCTGGCCCTG GCCGGTTACC ATCAGAAAAA AGGCGATGCG
GCGAAGGCCA TCGCCGTTTT GGACGAGGAA ATTAAACTTG ATCCTCGCGC CATTTCGGCT
CTCGAAGCAA AAGGGCGCAT CCTGGCATCG CAGAAGGAGT ACCAAAAGGC CCTCAAGGTA
TTCGACCAGG TCGAGGCCCT GAATGAGGAA CGTGGCGTCG CACTCAAGAT AGGCGCCTAT
GTGGCGATGA ACGATTCTTC CAAGGCTGTC GAGCAGGCAG GCCGTCTCAT CGCGAAGCGT
CCCGGTTCCA GCCAGGGGTA CCTGCTCCTC GCCACGGTCC ACCAGAGTCT CAGGAACATC
CCTGCCGCTA TCAACGAGGT GAACAAGGCA ATACGCGCCG ACGGCAAGAG CGTGGAGGCC
CGCATCGCCC TGGGCAACCT ATACCAGGCC ACGAAGGAGT ACGACAAGGC GCTCGCCTCT
TACCAATATG CGCATAGGAT GAACCCTGAT TCTGTCGCCG CCCAGTTCGC CATCGGCGCT
CTTTATGACA GCACCGGGAA AAAGAAACAG GCGGCGGATG CGTACCGCGC CGTACTACAG
AAAAACGACC GTTATGTCCC GGCCCTCAAC AATCTCGCCT ACCTCTGTGC CGATGGGTAC
GGAAGCAAGG AAGAAGCGCT TCGGCTGGCA ATCAGTGCTT TCAAGCAGCA GCCGGGCAAC
CCCGGCGTCA TGGACACCGT CGGCTATGCG CTGGCCAAGA ACGGCCGCAG TGCCGACGCG
GTGAAGGTTA TGGAACGGGC CGTCGCGCTG CTTCCCAACG ACCCGACCGT GCGCTACCAC
CTAGGACTCG CTTACTACTT GGCCGGAGAT AGGGCGAGGA GCGAGCAGGC GCTGCAAAAA
TCCCTTTCAC TGGGGCAATC GCCGGACACC AAGGCGGCGC AGACGCTCCT GGCCGAGTTG
AAGAGATAA
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| Protein sequence | MMKKFCLVLV ILLICFGCSS KTKESLYNEG KQQMEASNPG AAVVFFKNAL EKDGNYLEAR
FQLAKAYAAL GKNEQAEKEF TKVLTQNPTK DEVLLELAKL SNAAGKGDQG FRYATQYIAK
HPGTVDGLEA AGISYLVRKK YQEARNYLTQ ALSVDPSRSA TKLELASVDM ATGDTESAKA
LLNEVILAEQ KNFKALYMLA AIENSSGHGD KAAALYQKIL QLDQNQVNAL YKLGLLYLEK
GEVDKADQSA DQMIKAFPKR GDGHRLKGLA AFYRKRFDDA ITSLQQSVKL SPTLEAYHFL
GLSYYSKGEL ENALSQFRVV LDRVPEARKS RLMTAQTLLA QKRTEDGIAE IKKVLASDDN
DAVAHNLLGG AYMSHGLFEE GMRELNLATK LDPKMVNAHL KKGAFYFSKG RYAEGETELA
TAVQAAPDAQ NSRLLLASYY QSQKKPAKAL STLKSGLKGG KGDVPLYNAI ASLQLSAGNK
AEGIKTLEQA KRLDPGFAAT YQNLAGVHAA TGDYPRAMAE LNQLLTRDAG NLRALLGLAA
LSEISGKETD AVAYYQKATQ TKAPEAFLAL AGYHQKKGDA AKAIAVLDEE IKLDPRAISA
LEAKGRILAS QKEYQKALKV FDQVEALNEE RGVALKIGAY VAMNDSSKAV EQAGRLIAKR
PGSSQGYLLL ATVHQSLRNI PAAINEVNKA IRADGKSVEA RIALGNLYQA TKEYDKALAS
YQYAHRMNPD SVAAQFAIGA LYDSTGKKKQ AADAYRAVLQ KNDRYVPALN NLAYLCADGY
GSKEEALRLA ISAFKQQPGN PGVMDTVGYA LAKNGRSADA VKVMERAVAL LPNDPTVRYH
LGLAYYLAGD RARSEQALQK SLSLGQSPDT KAAQTLLAEL KR
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