Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2457 |
Symbol | |
ID | 8137798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2871363 |
End bp | 2872661 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644870067 |
Product | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) |
Protein accession | YP_003022258 |
Protein GI | 253701069 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 166 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCG GAATTGTGGC AGAGGTACCC ACAGCGGTTG GTCAGATCGA TACGTCCAGT TATGTCGTCC ATCGCTCCAG GCTGGTAGGG ACAGTCAGTG TGAGCGGCGC CAAAAACAGC GTGCTGCGGC TTCTGGCGGC CTCTCTTCTG ACCAGCGAGA GCATTGTGCT GAGGAACTAT CCGGTCGGCC TGCTCGACGC CAAGGTACAC GTCCAGATGC TTGAAGTGCT GGGAAAAAAC TGCGTCTGCG ACGGCGAGGA GATCACCATC ACGCAAGCTG CGGCTCCCCC GTCCCGTCTC GACTGGCAGG GACGCTCCAT ACGCAACACC CTTCTCATCC TCGGGGCTTT GGTGGCCCGC ACCGGTGAGG GGGCGGTTCC CCTCCCGGGC GGCTGCAAGT TAGGCGAGCG GAAGTACGAC CTGCACGAGA TGTTGCTGCA GCGCTTGGGC GCCAAGGTGT GGGAGGAGGA CGGGATGCTC TGCGCCCGCT CCACCGGACG CCTGGTCGGG ACCGATATCC ACCTGCCGAT CCGTTCCACC GGTGCGACGG AGAACGCCAT TATCTGCGGT ACGCTGGCAA GCGGGGTCAC CAGGATCTGG AATCCGCACA TCCGGCCGGA GATACTCGAC CTGATCCACT TGCTGCAGAG CATGGGGGCG TCGATCAGGG TGTTCGGACA GGAGCACATA GAGGTGACCG GTGTCGAACA ACTCCACGGC GCAAAGCATG TTGTCATCTC GGACAACATG GAGGCGATCA CCTGGCTGAT CGCATCGGTC ATCACCGGCG GCGACATTGA GATCTTCAAC TTCCCCTATC GGGACCTGGA GGTCCCCCTC ATTCACCTGA GGGAGAGCGG GGCGCGATTC TTCCGCGGCG ACAACAGCCT CATCGTAAGG GGGGGGCGTT GCTACCCCGT CGACATCAGC ACCGGTCCGT ATCCGGGCAT AAACTCGGAT ATGCAGCCGC TTTTCGCTGT TTACGGAGCG GTGGCGCAGG GGGAGACCCG CGTCATCGAC CTCCGTTTCC CGGGACGCTA CGCCTATGCG GAGGAGCTGG CCAAGATGGG GGTCTCCTCT GCCATCGACG GGAACCTCCT GAAAATAAGC GGAGGCAGGC CGCTCATCGG CGCGGAAGTG CGGGCCCTTG ACCTTCGCGC AGGCATCGCC CTGACCCTGG CCGGACTGGT CGCTGACGGC CGGACTGTGC TGCGCGAAGC ATGGCAGGTG GAGCGCGGTT ACAACAACTT CATGCACAAG ATGCAGCAGC TTGGAGGAAA CATCTCCTAT GGCTGCTGA
|
Protein sequence | MNTGIVAEVP TAVGQIDTSS YVVHRSRLVG TVSVSGAKNS VLRLLAASLL TSESIVLRNY PVGLLDAKVH VQMLEVLGKN CVCDGEEITI TQAAAPPSRL DWQGRSIRNT LLILGALVAR TGEGAVPLPG GCKLGERKYD LHEMLLQRLG AKVWEEDGML CARSTGRLVG TDIHLPIRST GATENAIICG TLASGVTRIW NPHIRPEILD LIHLLQSMGA SIRVFGQEHI EVTGVEQLHG AKHVVISDNM EAITWLIASV ITGGDIEIFN FPYRDLEVPL IHLRESGARF FRGDNSLIVR GGRCYPVDIS TGPYPGINSD MQPLFAVYGA VAQGETRVID LRFPGRYAYA EELAKMGVSS AIDGNLLKIS GGRPLIGAEV RALDLRAGIA LTLAGLVADG RTVLREAWQV ERGYNNFMHK MQQLGGNISY GC
|
| |