Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2449 |
Symbol | |
ID | 8137790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2856783 |
End bp | 2857994 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870059 |
Product | VanZ family protein |
Protein accession | YP_003022250 |
Protein GI | 253701061 |
COG category | [S] Function unknown |
COG ID | [COG5652] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 168 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAACGAA AATCGCTCTT TCCGGCCTTG GCCTGCGTCC TATTGATCGC CTACGCGTCT CTCTTCCCCC TAACCGGCTG GCGCCTACCC GGCGCCGGCT TTTTCGCCTG GTGCACCATT GAGCTTCCCG GCCGCGTCTC CAAGAGCGAC CTCCTCGTCA ACGTCATCGC CTACGTCCCT TTGGGCTACC TCCTTTTCCG CCTGTTCCGC CGGGATGACG GGCGCATCGC CGTTGCCTTT CTCTGCGCGC TCGCCGCCGG AAGCGCGCTC AGCTTCGCCA TGGAATTTAT CCAAGCCTTC CTCCCAAGCC GCACCCCCTC CGTCGTAGAC CTCTGCACCA ACACCCTGGG AACCTGCGCC GGCGCGCTCC TCGCGCTTTG CCGGCAGCAA GCGGCCGTGC CCGAAGGGGC CTGGTCCCGC TGGCGGGCGG GCTTTCTCAC AGCCGGTAGC CGGGGGGAGC TTGGCCTTTG CGTCCTTTTG CTCTGGCTTT GCTCCCAATG GGCACCCTTC GTCCCCTCGC TGGACTTAGG CGGCGTAAAG AACGGGCTCA AGCCCCTTTG GCAAACGGCG CGCGGACTGT CGCGCTTCGA CCTGGCGCAG GCCGCCACCT ACTTTTTCTA TTTAGCCGGG CTCGGGGTGG TGGCGCAGGA GACCTTCCGG CGGCGCGCCC TTGCCCTCCC CCTTTTCTCG TTTTTTGCGG CGGGCGTTCT CTGCGCCAAG ATCTTCATCC AGGGGCGACA GCTCTCCCTG GAGGCGTTAG CGGGGTTGTT AGCTGCTGTT CCGCTTCTGG TCGCGGCGGG GCTTATGGGG GAGAAGTCGA GAAGGGTTTT TTCGGGGTGC CTGCTGCTTA TCGCCGGTTT CGCCTTCTAC GAGTTGAAGC CGGGTGTGGG GAGTGTAGCG GGAGGGTTCA GTTGGATACC GCTGCAGGGG CAGTTGGCAC ACGAGCTGAG CGGCTTCGGG ACCATACTCG AAGGAGTGTG GCCTTTCGCG GCCATGGCGC TCCTGGTCGC GCCGGGGCGG GAAGAAGCGA GGGGTTCGTC CGCGCCGGGA GCGGCAGCCG TCTTTTGTTT CGTCTTCGCG CTGGAGTGGG TGCAGCTAGC GATCCCCGGC CGCACCCCCG ATCTGACCCA GGCGCTGTTG GCGCTCGCCG GTTGGCTCGC ACCGGCCTTC TATCTGCGAC AGGCGGAGCT GCGAGGTTGG ATTCGGACCT GA
|
Protein sequence | MKRKSLFPAL ACVLLIAYAS LFPLTGWRLP GAGFFAWCTI ELPGRVSKSD LLVNVIAYVP LGYLLFRLFR RDDGRIAVAF LCALAAGSAL SFAMEFIQAF LPSRTPSVVD LCTNTLGTCA GALLALCRQQ AAVPEGAWSR WRAGFLTAGS RGELGLCVLL LWLCSQWAPF VPSLDLGGVK NGLKPLWQTA RGLSRFDLAQ AATYFFYLAG LGVVAQETFR RRALALPLFS FFAAGVLCAK IFIQGRQLSL EALAGLLAAV PLLVAAGLMG EKSRRVFSGC LLLIAGFAFY ELKPGVGSVA GGFSWIPLQG QLAHELSGFG TILEGVWPFA AMALLVAPGR EEARGSSAPG AAAVFCFVFA LEWVQLAIPG RTPDLTQALL ALAGWLAPAF YLRQAELRGW IRT
|
| |