| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2416 |
|---|
| Symbol | |
|---|
| ID | 8137757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2812659 |
|---|
| End bp | 2813990 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644870026 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003022217 |
|---|
| Protein GI | 253701028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAT CAAGAAGCAT CATGTTCACC GACACCATGA TAAGGAAGCT GAAGCCGGGC
GAGGTCAAAT ACATCCGTTC CGAGGGGAAT GGGTTTACGG TTAGGGTCAT GCCCTCGGGC
GTGAAGACCT GGCTATACCT TTATAGCTTC GAAGGCAAGC GCCGCGAAAT GAACTTGGGG
GGGTATCCCC ATGTTAGCCT TGAGACGGCA AGGGAGAGAT TCGAGGCGGC CCGTAAGAAG
GTGAAGAACA ACATCGACCC CATGGCTGAA AACCCGAAGG TGGCCGAAGT TGTGGAGGTG
GAGCGCAGGC ACGATTTGAC CTTCGATGAA CTGGCCCAAG AATATATAGC CGACAACGTC
GAAGATCAGT TGGTCGATTT CTCCGTGTAC GGCATCAAGC GTATTCTGCT CACATCAGGA
AAGCCGGGCG GGATCGACGA TTTTAAGGAG TGGCGTTCCA GAAAGGTCGC CACCATTACG
ACGGAAGACG CCGCGAAGCT CCTTAAAGAT GTTGCCGTCA GGTCGGCGGC CGCCGCGCGT
AACCTGATTC GGACGGCGCG CCCCATGTTC GCCTACGCCG TTGCACGCGG CATGATCATG
AGCAACCCCT TCATCCTGGG GAGCGTCAAG AGCTTTCTGT CCAAGCCGGT GCAAAGCATG
CTGGAGCCGA GCGTGAAGAA CAGGACCTTC AGTGAAGAGG AGATCCGTCA CTTCTGGGCG
TCGCTTTCCA AGGGGAAGGG GACCGTGGAG TCGAAGAATG CCCTGCGCCT CATGCTCCTC
ACCGGGCAAC GTCCCTCAGA GGTATTGGGG ATGCACTCCG ACGAGATCTC CGGCAACTGG
TGGACCCTCC CCAAAGCAAG GACCAAGGCG CGTCACGACA AGAACCGGGT GGACCATATG
GTGTACCTGG TGCCGGAGGC GCTGGAACTG ATCGGGAACA AGAAGGGGAT CATCTTTCAG
TCCCAGGTGA AAAGCAGAAA CGGTCTACCG ATGGCGCCGA GAGCCATATC GGTGAACGCC
CTAGGGCACA TGATTTCGAC CTACAACGAC TACTTCGGGC TCCCGCCATG GGGAGCACAC
GACCTGCGCC GGACCTGCCG CACTTTCCTG TCCGACATCG ACGGCATCAC CGCCAACGCG
GCGGAGGCGA TCCTGAACCA CGCGAGGGAA GGGACCAAGA AAAACTACGA CCACCACCGC
TACCAGCGCC AGATCGAGAC GGCGTTGACC CTTTGGCGTG ACAAGCTGGT GGAGATCATA
GGAGAGCCAC TGGTGCCGGA ACTGCCTAGC AACGTGATAC CGCTCCGGCG CAGGGTCGAA
GCGCCGGAGT AG
|
|---|
| Protein sequence | MARSRSIMFT DTMIRKLKPG EVKYIRSEGN GFTVRVMPSG VKTWLYLYSF EGKRREMNLG
GYPHVSLETA RERFEAARKK VKNNIDPMAE NPKVAEVVEV ERRHDLTFDE LAQEYIADNV
EDQLVDFSVY GIKRILLTSG KPGGIDDFKE WRSRKVATIT TEDAAKLLKD VAVRSAAAAR
NLIRTARPMF AYAVARGMIM SNPFILGSVK SFLSKPVQSM LEPSVKNRTF SEEEIRHFWA
SLSKGKGTVE SKNALRLMLL TGQRPSEVLG MHSDEISGNW WTLPKARTKA RHDKNRVDHM
VYLVPEALEL IGNKKGIIFQ SQVKSRNGLP MAPRAISVNA LGHMISTYND YFGLPPWGAH
DLRRTCRTFL SDIDGITANA AEAILNHARE GTKKNYDHHR YQRQIETALT LWRDKLVEII
GEPLVPELPS NVIPLRRRVE APE
|
|---|
| |