Gene GM21_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2407 
Symbol 
ID8137748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2804019 
End bp2804495 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID644870018 
Productnuclease (SNase domain protein) 
Protein accessionYP_003022209 
Protein GI253701020 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0000492982 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACCACA AAACAAGCGA GCCCATCAAA ACCCAAGTTA GTGACGGTGA CACTGTGCAG 
GTGCAGGATG GCCTGGGGAC TAAGGTGAAG GTCCGGCTGC ACGGGATCGA TGCACCGGAG 
ACGGAGAAGA AGAACCGGAA GACTGGTAGG ATCTCCAAAC CAGGTCAGCC TTATGGTGAG 
GAGGCCTTTC AGGCGCTCAA TGGGAAGATC GGCGGGCAAA GGGTCACGGT TGAGGTGCGG 
GATATCGACA GGTATCGGCG TGCGGTGTCT GTGGTGCGCC TTGGGGAGCG GGATATCAAC 
CGGGAGATGG TGCGGGAGGG GTTTGCCTGG GCGTATCGAC GGTATCTTGA TCGGGCGTAT 
GCCTCGGAAT ATATCAGGGC GGAGGAGTTG GCTAGGCGGG AGAAACGGGG GCTTTGGCGG 
CAGGGGAATC CGCAGCCGCC TTGGGAGTTT AGGAAAACGC TCAGAGGGCG TCAATAG
 
Protein sequence
MYHKTSEPIK TQVSDGDTVQ VQDGLGTKVK VRLHGIDAPE TEKKNRKTGR ISKPGQPYGE 
EAFQALNGKI GGQRVTVEVR DIDRYRRAVS VVRLGERDIN REMVREGFAW AYRRYLDRAY 
ASEYIRAEEL ARREKRGLWR QGNPQPPWEF RKTLRGRQ