| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2348 |
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| Symbol | |
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| ID | 8137689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2729569 |
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| End bp | 2732001 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644869963 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_003022154 |
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| Protein GI | 253700965 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 106 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCAATA CTGGTGAGTA CAGGAAAAAG CCGGACCGGC TGGCCGATCT CCTCCCCTGG
GCCGCCCTGG TCGCGCCGGG AACAGTCCTC AACAAGGACG GCTCCTTCCA AAGGACCTTC
TCCTATCGCG GCCCCGATCT GGACAGCGCC ACCGAATCGG AATTGATCTC CGTCGCCGCC
CGGGTCAACA ACGCCTTTAA GCGCTTAAGC TCCGGCTGGG CGATATGGGT TGAAGCCCAG
AGGATGGTGG CTAAGGAGTA CCCTCCCGCC AGCTTTCAAA ACACCCTCGC TTTCCTGATC
GATGAGGAAC GCCGGGCATC CTTCCAGAAC AACGACCATT TCGAGAGCGC CTATTTTCTA
ACCATCCTCT ATCTTCCTCC CTCGGAAACG CGGAACCGAC TGGCGGCCCT CTGCCTGGAA
AACAAGCGGA ACAGTTCCGT GGACTACAAG GCGCAACTGG ACCAGTTCAG CGCGGAAACC
GACCGGCTGC TCGACCTGAT GCAAGGAGTT TTTCCCGAGA TTCACCCCCT GGACGACCAG
CAAACCCTCA CCTTCCTGCA CAGCACCATC AGCGTAAAAC GCCATCAGGT GCGGGTCCCA
GAGATCCCGA TGTACCTGGA CGCAGTGCTT CCCGACTCCC CCCTGATCGG CGGCCTCGAA
CCACAGTTGG GGGAAGCCGC CTTGAAGGCG ATCTCCGTCC TAGGATATCC TGGCCAGTGC
GTCCCCGGGC TGTTGGACAA CCTGAACCGC CTTTCCCTGG AATACCGGTG GGTGACCCGG
TTCATCTGCA TGGACAAGAC CGAGGCCCTG AGCGAGATCG CCAAGTACAA AAAGCGCTGG
TTCGCGAAAA GGAAGAGCGT GCTGGTGCTG ATAAAAGAGG GACTCACCGG GCAGGAAAGC
GCCATGGCCG ACAGCGACGC CGAGAACAAG GCCTATGACG CCGACGCCGC ATTCCAGGAG
CTCGCCGGCG ATTACGTGAG CTACGGGTAC TTCACCGTGA CCGTCGTCCT CTGGGACGAG
GAGCCGGAAC AGCTCCAGGC CAAATCCAGG GCGGTCGAGC AGGTGATCAA CGGCCTCGGG
TTCGTCACCA TCAGCGAGAC CATGAACGCC GTGGACGCCT GGCTCGGCAC CCTTCCCGGA
CACGCCCGGG CCAACGTGCG GCGCCCCATC CTAAACACCT TGAACCTCGC CCACCTGATG
CCGGTGTCCG CGGTGTGGGC GGGACCGGAA AGGAACCAAC ACCTGGACGC GCCGGTGCTG
ATGCATGCCA CCACCTCCGG CAACACCCCT TTCCGCTTCA ACCTCCATGT GGGCGACGTC
GGACACACCA TGATCTGCGG CCCCACCGGA GCGGGAAAGG ACGTGCTCAT GGCCACACTG
CAGGCGCAGT TTCTGCGCTA TCCCGACAGC CAGATCTACA TCTTCGACAA GGGGGGATCG
TCCCGGGTGA TCACCTCCGG GCTCGGGGGG GACTTCTACG ACCTGGGCAG CGGCGGCGAC
CTTGCCTTCC AGCCGTTGGC AGGTGTGGAC CAGGAGTTTG AGCGGAGCTG GGCGAGCCAG
TGGGTCCTCG ATGTGCTACA GCAGGAGAAC ATCGACATCA CCCCGAGGAT CAAGGCAGAA
GTCTGGGGGA CGCTCACGAG CCTCGCCACC ACGCCTCCGG CACAGCGCAC CATCTCAGGA
TTCATAGCCT TGAGCCAGAA CCAGGGAGTG CGGCAGGCGC TAGCCCCATA CTCGATAGAT
GGCCCCCTCG GCTCTATCTT CGACGCCACC CGCGACACGC TCCAGTATTC GCGCTGGCAG
AGCTTCGAGA TGGAGACCCT GATGGGAACC CCTGCCGCCG TGGTTCCCGC GCTCTCTTAT
CTGTTCCACC GCCTGGAGCA GAGGTTTTCC GCCGCCACCC CATCGCTTCT TTTCCTGAAC
GAGGCCTGGC TCTTCTTCGA CAACCCCGTG TTCGCCCCCA GGATCAGGGA GTGGCTCAAG
ACCTTGCGGA AGCTGAACGT CTCCGTCGTC TTCGCGACCC AGGGGCTCGC CGACATAGAG
AGTTGCCCCA TCTCCGCCAC CCTCATCGAG AGTTGCCCCA CCAGGATCTT CCTCCCCAAC
GAACGGGCCA TGGAAGAAGA GACAGCCAGG GTGTACCGGC GCTTCGGATT GAACGACAGG
CAGATTCAGA TGCTCGCCGT AGCCCAGCCC AAGCGCCAGT ATTACTATCA GAGCACGCTG
GGCAACCGTC TCTTCGAGCT GGGGCTGGGC CCTTTGGGCC TCGCCTTTTG CGCGGCCACC
GGGAAAGAGG ACCAGAACCT GGCAAAGAAG ATCTTGGCAG AACAGGGGAA GGAGCAATTC
AGCAAAGCCT GGCTCAACTG CAAGGGGCTT CCGTGGGCCG GCGAGCTTTT GCAAAGGAGC
TTTTCCGGAG GTGCACCATG TTCAAGCGAG TGA
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| Protein sequence | MFNTGEYRKK PDRLADLLPW AALVAPGTVL NKDGSFQRTF SYRGPDLDSA TESELISVAA
RVNNAFKRLS SGWAIWVEAQ RMVAKEYPPA SFQNTLAFLI DEERRASFQN NDHFESAYFL
TILYLPPSET RNRLAALCLE NKRNSSVDYK AQLDQFSAET DRLLDLMQGV FPEIHPLDDQ
QTLTFLHSTI SVKRHQVRVP EIPMYLDAVL PDSPLIGGLE PQLGEAALKA ISVLGYPGQC
VPGLLDNLNR LSLEYRWVTR FICMDKTEAL SEIAKYKKRW FAKRKSVLVL IKEGLTGQES
AMADSDAENK AYDADAAFQE LAGDYVSYGY FTVTVVLWDE EPEQLQAKSR AVEQVINGLG
FVTISETMNA VDAWLGTLPG HARANVRRPI LNTLNLAHLM PVSAVWAGPE RNQHLDAPVL
MHATTSGNTP FRFNLHVGDV GHTMICGPTG AGKDVLMATL QAQFLRYPDS QIYIFDKGGS
SRVITSGLGG DFYDLGSGGD LAFQPLAGVD QEFERSWASQ WVLDVLQQEN IDITPRIKAE
VWGTLTSLAT TPPAQRTISG FIALSQNQGV RQALAPYSID GPLGSIFDAT RDTLQYSRWQ
SFEMETLMGT PAAVVPALSY LFHRLEQRFS AATPSLLFLN EAWLFFDNPV FAPRIREWLK
TLRKLNVSVV FATQGLADIE SCPISATLIE SCPTRIFLPN ERAMEEETAR VYRRFGLNDR
QIQMLAVAQP KRQYYYQSTL GNRLFELGLG PLGLAFCAAT GKEDQNLAKK ILAEQGKEQF
SKAWLNCKGL PWAGELLQRS FSGGAPCSSE
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