Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2346 |
Symbol | |
ID | 8137687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2727640 |
End bp | 2728815 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644869961 |
Product | P-type conjugative transfer protein TrbL |
Protein accession | YP_003022152 |
Protein GI | 253700963 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 113 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACTG GAATTCTCAC TCATCTTCTG AATCAATTTT TGGGTGTGTT CTCTCTGGGG TATGGCGAGT TACTTCCAGA TGCCCGTCAT CTTTTGTGGC TGCTCGCCAC TTTGGAAATA GCCTTGGCAG GATTATGGTG GGCTTTTGAT GACGGACAAA GAATTGAGAA AGCCCTGCTT GTAAAGATCA TGCAGATCGG GTTCTTTGTT TGGGTTATAA GCAACTATAG GTGGTTAATA GATACGATAT TGTACGGATT TATAGTCACT GGCACCAAAG CAGGGGGGGC TACGCGTACG GACCTTTTGC AGGATCCTTC ACTGATTGTT GATTACGGTT TTGCGGCTAC GGATCCTATT TTTAGACATT TAAAAGACCA TTACCTCGCG GCAGGGCTCC CGGATCTTGT CCTTTCAGGG CTTGCGGGTG TGCTGATACT TCTCGCCTAT TTCGCAATTG CCGCAGCGGC TTTTATCACC TACCTGGAAT TCTATATCAT TTCACTGCTT GGCTTGATTC TAGTTCCGTT TGGGGTCTTT AAACATACTT CCTTTTTGGC GGAGAAAGTC TTTGGCGCCG TAATCGCCTA CGGCATCCGA CTCATGGTCT TAGCTTTTGT ACTGGCCGTA GTTGAACCAA CTCTGGCCCA AGTCCAGCTG CCTGTCAGTC CAACTCTGTC GCAGATATTC ACTGTGTTCC TTGCAGCTTT TACCATCGCC GTGTTGTCCT GGCACGCTCC CGGTATTGCA AGCGGTTTGA TGGCTGGTTC ACCCTCATTG GGCGTTGGCA CCATGATGAG TACGGGATTA GCCGCTGGAG CCGGTATCGT CGGACTTGGA GCAGCCGCTG GGTTAGGTTC CGCCATGAGT TCAGCGAAAA AGGGGTTAGG GCAGGTAATC GCGGCGTCAG GGGGTGAGTT CTCCCATACA GCAGACAAGA CTGACGGTGG AGGTGGCGGT AGCATGTCTG CCGGGAATCC TCCGCCAGAC AAGTCTTCAG GCCCGGTCTC TTCATCAGGC CCCTCGCCAA GTTCATCTAG TTCATCAAGG ACACCTTCAT CATCAGACGG TTCTGGAATG CCAGTCTGGG CTCAGAACCT CATGCTGGCG CAGCACGCCA TCCCGCAGGA ATCGCATCCA GGAACCGGCA TGTCGGCCCC TATAAGGCAC GACTAA
|
Protein sequence | MDTGILTHLL NQFLGVFSLG YGELLPDARH LLWLLATLEI ALAGLWWAFD DGQRIEKALL VKIMQIGFFV WVISNYRWLI DTILYGFIVT GTKAGGATRT DLLQDPSLIV DYGFAATDPI FRHLKDHYLA AGLPDLVLSG LAGVLILLAY FAIAAAAFIT YLEFYIISLL GLILVPFGVF KHTSFLAEKV FGAVIAYGIR LMVLAFVLAV VEPTLAQVQL PVSPTLSQIF TVFLAAFTIA VLSWHAPGIA SGLMAGSPSL GVGTMMSTGL AAGAGIVGLG AAAGLGSAMS SAKKGLGQVI AASGGEFSHT ADKTDGGGGG SMSAGNPPPD KSSGPVSSSG PSPSSSSSSR TPSSSDGSGM PVWAQNLMLA QHAIPQESHP GTGMSAPIRH D
|
| |