Gene GM21_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2346 
Symbol 
ID8137687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2727640 
End bp2728815 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content52% 
IMG OID644869961 
ProductP-type conjugative transfer protein TrbL 
Protein accessionYP_003022152 
Protein GI253700963 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones113 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTG GAATTCTCAC TCATCTTCTG AATCAATTTT TGGGTGTGTT CTCTCTGGGG 
TATGGCGAGT TACTTCCAGA TGCCCGTCAT CTTTTGTGGC TGCTCGCCAC TTTGGAAATA
GCCTTGGCAG GATTATGGTG GGCTTTTGAT GACGGACAAA GAATTGAGAA AGCCCTGCTT
GTAAAGATCA TGCAGATCGG GTTCTTTGTT TGGGTTATAA GCAACTATAG GTGGTTAATA
GATACGATAT TGTACGGATT TATAGTCACT GGCACCAAAG CAGGGGGGGC TACGCGTACG
GACCTTTTGC AGGATCCTTC ACTGATTGTT GATTACGGTT TTGCGGCTAC GGATCCTATT
TTTAGACATT TAAAAGACCA TTACCTCGCG GCAGGGCTCC CGGATCTTGT CCTTTCAGGG
CTTGCGGGTG TGCTGATACT TCTCGCCTAT TTCGCAATTG CCGCAGCGGC TTTTATCACC
TACCTGGAAT TCTATATCAT TTCACTGCTT GGCTTGATTC TAGTTCCGTT TGGGGTCTTT
AAACATACTT CCTTTTTGGC GGAGAAAGTC TTTGGCGCCG TAATCGCCTA CGGCATCCGA
CTCATGGTCT TAGCTTTTGT ACTGGCCGTA GTTGAACCAA CTCTGGCCCA AGTCCAGCTG
CCTGTCAGTC CAACTCTGTC GCAGATATTC ACTGTGTTCC TTGCAGCTTT TACCATCGCC
GTGTTGTCCT GGCACGCTCC CGGTATTGCA AGCGGTTTGA TGGCTGGTTC ACCCTCATTG
GGCGTTGGCA CCATGATGAG TACGGGATTA GCCGCTGGAG CCGGTATCGT CGGACTTGGA
GCAGCCGCTG GGTTAGGTTC CGCCATGAGT TCAGCGAAAA AGGGGTTAGG GCAGGTAATC
GCGGCGTCAG GGGGTGAGTT CTCCCATACA GCAGACAAGA CTGACGGTGG AGGTGGCGGT
AGCATGTCTG CCGGGAATCC TCCGCCAGAC AAGTCTTCAG GCCCGGTCTC TTCATCAGGC
CCCTCGCCAA GTTCATCTAG TTCATCAAGG ACACCTTCAT CATCAGACGG TTCTGGAATG
CCAGTCTGGG CTCAGAACCT CATGCTGGCG CAGCACGCCA TCCCGCAGGA ATCGCATCCA
GGAACCGGCA TGTCGGCCCC TATAAGGCAC GACTAA
 
Protein sequence
MDTGILTHLL NQFLGVFSLG YGELLPDARH LLWLLATLEI ALAGLWWAFD DGQRIEKALL 
VKIMQIGFFV WVISNYRWLI DTILYGFIVT GTKAGGATRT DLLQDPSLIV DYGFAATDPI
FRHLKDHYLA AGLPDLVLSG LAGVLILLAY FAIAAAAFIT YLEFYIISLL GLILVPFGVF
KHTSFLAEKV FGAVIAYGIR LMVLAFVLAV VEPTLAQVQL PVSPTLSQIF TVFLAAFTIA
VLSWHAPGIA SGLMAGSPSL GVGTMMSTGL AAGAGIVGLG AAAGLGSAMS SAKKGLGQVI
AASGGEFSHT ADKTDGGGGG SMSAGNPPPD KSSGPVSSSG PSPSSSSSSR TPSSSDGSGM
PVWAQNLMLA QHAIPQESHP GTGMSAPIRH D