| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2286 |
|---|
| Symbol | |
|---|
| ID | 8137626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2666156 |
|---|
| End bp | 2666941 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644869901 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003022093 |
|---|
| Protein GI | 253700904 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.00000000263216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG AAGCAAAGAA GCAGATCATC GACGTCGGGG ACGGCGCAGC CATCCCCCGC
AAAAGCGACC GCGGACTCTT CACCGCGTGG CGCATAGCCT TCTTCGGGGC CATCGGCACC
CTGGTTTATC TGGTACAGAC CAAACCGGAC CCGTACCTGA ACATTCTCAA GTTCGTACCC
GACGGCATAC TGGTCACCTT CCAGGTGACC CTCGGGGCGA TTCTCCTTGC CATCGTCTTA
GGCCTCTTCA CCGGCCTCGG AAGGATCTCC AAGAACCGCT TCATCAACGG CACAGCCTCG
CTCTACGTCG AGATCATCCG GGGCATTCCG CTCCTGGTGC AGATTTTCTA CATCTACTAT
GCCCTCGGGA GCTTCGTGCA GGTCCCTCCC ATCCTTTCCG CCATTATCGC CATGGCTGTC
TGCTACGGCG CTTACATGGG CGAGGTGGTG CGGGCGGGGA TCGAGTCGAT CCACAAGGGG
CAGAGGGAAG CAGCGCTTTC GCTCGGCATG AACGGGCGCC AGACCATGAT CCACGTCATC
CTGCCGCAGG CGGTGAAGGT GATCCTGCCG CCGGTGGGCA ACGAGTTCAT CGCCCTATTG
AAGGATTCCT CGCTTGTTTC CATCATCGCC GTCGCTGATC TCCTGCGCCG TGGCCGCGAA
TTCGCCTCCG AGTCTTTCAC CTATTTCGAG ACCTACACGG TCATAGCGCT GATTTACCTG
ATCATCACCT TGTTCTTCTC GAAGATCATC GGCGTCATGG AGGAGCGTGT CAGTGTCAAC
AAGTAA
|
|---|
| Protein sequence | MSIEAKKQII DVGDGAAIPR KSDRGLFTAW RIAFFGAIGT LVYLVQTKPD PYLNILKFVP
DGILVTFQVT LGAILLAIVL GLFTGLGRIS KNRFINGTAS LYVEIIRGIP LLVQIFYIYY
ALGSFVQVPP ILSAIIAMAV CYGAYMGEVV RAGIESIHKG QREAALSLGM NGRQTMIHVI
LPQAVKVILP PVGNEFIALL KDSSLVSIIA VADLLRRGRE FASESFTYFE TYTVIALIYL
IITLFFSKII GVMEERVSVN K
|
|---|
| |