Gene GM21_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2276 
Symbol 
ID8137616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2654609 
End bp2655907 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content65% 
IMG OID644869891 
Productouter membrane efflux protein 
Protein accessionYP_003022083 
Protein GI253700894 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.0693511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTATG TGCCGCAGAA AATGAAAAAC GTCCTGGTGG TCGCTGCAAT GGGCCTGTTG 
CTCTGCGCAA CTGCGGGGCC GGCCCAGGGC GAGGAGATTT CGCTGCAGCA GGCAGTGGAG
ATCGCCATCC AAAATAATGC GGAGCTGAAC GCCTTCCGCA ATGAAGAGGG GCTTCGCGAA
GCGGCGAAGA CGAAGGCGGG CCTGCTGCCC AACCCGACGC TGGAGGTCGG CCTCGAATCC
GGCGCCCTGA CCGGCAACAG CGGGGAGAAT GCCTTTTCCC TCGGCGTATC TCAGGAGTTT
CTCCTGGCGG GAAAGAGGGA GAAGAGGCTT ACCCTGGCGC AAAAGGAGCT GGAGGTATAC
CGCTGGCAAC TGGCCGACCG GGAGAGGCTG CTCCGCCTCG ACGCGAAGTC TCGGTATTAC
CAGGTGCTGC TGGCCGTCAG GAACCTCAAG CTGGCCGAGG GGGGGATCGA GCTGAACCGC
CACCTTTACC AGGTGGCCAA GGAGCGTCTC GCCGCCGGCG ACATCCCTGA ACTGGAACTG
AATCTGGTGC AGGTGGAGCT GGCCAGGAGC GAGGGTGCGA GAACCGCCGC TCTTGAGGCC
GTTTTAGCCA GCCGTGCCGA GCTCTCCCTC CTCTTGGGGG GGAGCGAGGT CGAGCCGGCG
CTGCCGACCG GGTCCCTGGA AGCGGGGGGC GCGGTAAAGG AGGCGCAGGC TGAGCTCTTC
CGGCTCGCCC TGGACCGGCG CCCTGATCTC AAGGCGCTTA GGGCCGAGGC GGAGAGGGGG
GGCGCGGAGC TTTCGCTGGC CCAGGCCGAG GGGGTCCCGA ACCTCACCGC CGGCCTTGAG
CTCAAGCGCG ACACCACCGC GGTCGAGGTG GCGGGGCTGG AAGGGAAAGA CACCGCTTAT
ACCGTCGGGC TCACTCTCTC CATGCCGATA CCGCTTTTCG ACAGGAACCA GCCGGGCGTC
CGCGAGGCCG GCGTCAGACG GGACAGCGCC GGCAGTCGCC TCGCCGCCGC GGTGAAACGG
GTAGAGCGCG AGGTGGCCAC GGCCTACGCC GGCCTCTCCA ACGCCGAAGC GCTTCTTTCC
CTGTACCTAA AGAACGTCAT GCCCCAGCTA GAGGAGAACC TGAAACTGAC CGGCGAGGCC
TACCAACTGG GTGAAGTCCC CGTGTTGACG GTCATCGAAG AGCAGAAGAA GTACCTCGAG
GTGAACCAGG GGTACCTGGA AGCCCTGAAC CAGCGGCAGC AGGCGCTTTT CAAACTGGAA
GCGGCGGCGG CAACCGAACT TACCGGAGGT GTGCAGTGA
 
Protein sequence
MLYVPQKMKN VLVVAAMGLL LCATAGPAQG EEISLQQAVE IAIQNNAELN AFRNEEGLRE 
AAKTKAGLLP NPTLEVGLES GALTGNSGEN AFSLGVSQEF LLAGKREKRL TLAQKELEVY
RWQLADRERL LRLDAKSRYY QVLLAVRNLK LAEGGIELNR HLYQVAKERL AAGDIPELEL
NLVQVELARS EGARTAALEA VLASRAELSL LLGGSEVEPA LPTGSLEAGG AVKEAQAELF
RLALDRRPDL KALRAEAERG GAELSLAQAE GVPNLTAGLE LKRDTTAVEV AGLEGKDTAY
TVGLTLSMPI PLFDRNQPGV REAGVRRDSA GSRLAAAVKR VEREVATAYA GLSNAEALLS
LYLKNVMPQL EENLKLTGEA YQLGEVPVLT VIEEQKKYLE VNQGYLEALN QRQQALFKLE
AAAATELTGG VQ