Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2263 |
Symbol | |
ID | 8137603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2637142 |
End bp | 2639040 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869878 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003022070 |
Protein GI | 253700881 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGC AGAAAAACCG GATCCGCAGC TTCGCGCTGC TTTTGGCCGG TTTCTGGACC ATAGCCATCG CGATCTCGTT CGCCTGGCTT TATCATCACG AAAAGAACAG CGTGGTGGAA GTGGCTCGTG CCGAGGCCCG GGCTTCCTTC GGTAAGGACA CCCTGTTTCG CCGCTGGGGA AACTGGCACG GCGGCGTCTA TGTCGCGGTG ACCGAGGCCA CCCTCCCGAA CCCTTATCTC GCCCACATAC CCGAACGCGA CATAACCACC CCCTCCGGAA AGCGGCTTAC CCTGATCAAC CCCGCGTACA TGATGCGGCA GGTCTTCGAA CTGGCGGATG GGCGTGGGGA CATGATCCGC GGCCACATCA CCAGCCTCAA GCCGTTGCGC CCCGAAAATA CCCCCGACGC TTGGGAGGCG AACGCGCTTC GTCAGTTCGA GAACGGGGTA CAGGAGGTGA GTGAGGTCCA AAAAGTTGGC GATCACGAGC ACCTAAGGCT CATGCGACCC TTCATGGCAG AGGAGGGATG CCTCAAATGC CACGGAGGGC AGGGATACAA GGTGGGCGAT GTGCGGGGAG GGGTCAGCGT CTCCGTTTCG CTCGAGAACA AGGAGGGGTA CGCCAAGAGC GCCGTCGGCT TCGGCCTCCT CAGCTACGGG ATGCTCTGGC TCTTCGGGAT GGGGTTGATC CTGGCCGGTG CCGGGATTCT TTCCAGGAAC TTGAGCATCC TGGAGCAAAG CGAGGAGCGC TACCGCACCG TGGCGGACTA CACCGCCGAC TGGGAATACT GGCAGGGGCT CGACGGTTCC TTCAAGTACA TCTCCCCTTC CTGCAAGGAG ATCTCTGATT ACAGTCACGA CGAATTCCAT GACGACCCCG GGCTTATAGA GCGGATCGTT CACCCGGACG ATCAGGCAGC CTTGGACGAT CATGCGCATG CGGCGAAGAA GGGAGAGTCC CATTCGCTCG ACTTCCGCAT CGTCAGGCGC GACGGCGAAG TGAGGTGGAT CTCGCACGTC TGTCAGAAGG TTTACACAAG CGACGGGGCC GAGAACGGCA TCCGCGCCAG CAACCGGGAT ATCACCGATC GCAAGAAAGC CGAGGCGGCG GTGAAGGAGC AGGCGCTGCT GCTGGAAAAC GAGGTGCGCG AGCGGATGGT GCGCGAGGTG GAACTGGAGG CGAAGAACGC TGAGTTGGAG CGCTTCACCT ACACGGTCTC CCATGACTTG AAGAGCCCGC TCATCACCAT CAAGGGGTTC GCGGGTGCGG TCCTTAAGGA CATCGAGGCC GGCAAGCTTT CGCGGCTCGA CTCCGACGTG AAAAGGATCA TGGGGGCCGC CGACAAGATG GCAGCGCTTT TAAGCGATCT TCTGGAGCTC TCCAGGATCG GCCGGATCAT GAACCCTCCC TCTAAGATCG ACCTGAACCT GCTGGCGCAG GAGGTGCTGG GACAGCTCTC CGGCCCGATA TCGCAGGGCG GGGTGGAGGT GGTACTGCAG CCGGGGCTGC CGGAAGTCTG GGGAGACGCC CCGCGCATCG CCGAGGTGCT GCAAAACCTG GTGGAAAACG CGGTGAAGTA CATGGGGGAG CAACTGCAGC CGCTGGTGGA GATCGGCGTG CGGGAAGGGG AGGGCGAGCA GGTGTTCTGG GTACGGGACA ACGGCATGGG GATAGCGGAG CAGTATCGGG AAACCGTCTT CGGGCTCTTC AACAAGCTCG ACCCGCACTC GGAGGGTACC GGGATCGGGC TCGCGCTGGC GCGCCGCATC GTCGAATTCC ACGACGGAAG GCTCTGGGTC GAATCGGAAG GCCCGGGCCT CGGGAGCACC TTCTGCTTCA CGCTGGGCAA CAAGAGACCC GATGCCGGTG ACACTGCTAT AAAAGGAGGG ACAACATGA
|
Protein sequence | MIKQKNRIRS FALLLAGFWT IAIAISFAWL YHHEKNSVVE VARAEARASF GKDTLFRRWG NWHGGVYVAV TEATLPNPYL AHIPERDITT PSGKRLTLIN PAYMMRQVFE LADGRGDMIR GHITSLKPLR PENTPDAWEA NALRQFENGV QEVSEVQKVG DHEHLRLMRP FMAEEGCLKC HGGQGYKVGD VRGGVSVSVS LENKEGYAKS AVGFGLLSYG MLWLFGMGLI LAGAGILSRN LSILEQSEER YRTVADYTAD WEYWQGLDGS FKYISPSCKE ISDYSHDEFH DDPGLIERIV HPDDQAALDD HAHAAKKGES HSLDFRIVRR DGEVRWISHV CQKVYTSDGA ENGIRASNRD ITDRKKAEAA VKEQALLLEN EVRERMVREV ELEAKNAELE RFTYTVSHDL KSPLITIKGF AGAVLKDIEA GKLSRLDSDV KRIMGAADKM AALLSDLLEL SRIGRIMNPP SKIDLNLLAQ EVLGQLSGPI SQGGVEVVLQ PGLPEVWGDA PRIAEVLQNL VENAVKYMGE QLQPLVEIGV REGEGEQVFW VRDNGMGIAE QYRETVFGLF NKLDPHSEGT GIGLALARRI VEFHDGRLWV ESEGPGLGST FCFTLGNKRP DAGDTAIKGG TT
|
| |