Gene GM21_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2263 
Symbol 
ID8137603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2637142 
End bp2639040 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content62% 
IMG OID644869878 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003022070 
Protein GI253700881 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC AGAAAAACCG GATCCGCAGC TTCGCGCTGC TTTTGGCCGG TTTCTGGACC 
ATAGCCATCG CGATCTCGTT CGCCTGGCTT TATCATCACG AAAAGAACAG CGTGGTGGAA
GTGGCTCGTG CCGAGGCCCG GGCTTCCTTC GGTAAGGACA CCCTGTTTCG CCGCTGGGGA
AACTGGCACG GCGGCGTCTA TGTCGCGGTG ACCGAGGCCA CCCTCCCGAA CCCTTATCTC
GCCCACATAC CCGAACGCGA CATAACCACC CCCTCCGGAA AGCGGCTTAC CCTGATCAAC
CCCGCGTACA TGATGCGGCA GGTCTTCGAA CTGGCGGATG GGCGTGGGGA CATGATCCGC
GGCCACATCA CCAGCCTCAA GCCGTTGCGC CCCGAAAATA CCCCCGACGC TTGGGAGGCG
AACGCGCTTC GTCAGTTCGA GAACGGGGTA CAGGAGGTGA GTGAGGTCCA AAAAGTTGGC
GATCACGAGC ACCTAAGGCT CATGCGACCC TTCATGGCAG AGGAGGGATG CCTCAAATGC
CACGGAGGGC AGGGATACAA GGTGGGCGAT GTGCGGGGAG GGGTCAGCGT CTCCGTTTCG
CTCGAGAACA AGGAGGGGTA CGCCAAGAGC GCCGTCGGCT TCGGCCTCCT CAGCTACGGG
ATGCTCTGGC TCTTCGGGAT GGGGTTGATC CTGGCCGGTG CCGGGATTCT TTCCAGGAAC
TTGAGCATCC TGGAGCAAAG CGAGGAGCGC TACCGCACCG TGGCGGACTA CACCGCCGAC
TGGGAATACT GGCAGGGGCT CGACGGTTCC TTCAAGTACA TCTCCCCTTC CTGCAAGGAG
ATCTCTGATT ACAGTCACGA CGAATTCCAT GACGACCCCG GGCTTATAGA GCGGATCGTT
CACCCGGACG ATCAGGCAGC CTTGGACGAT CATGCGCATG CGGCGAAGAA GGGAGAGTCC
CATTCGCTCG ACTTCCGCAT CGTCAGGCGC GACGGCGAAG TGAGGTGGAT CTCGCACGTC
TGTCAGAAGG TTTACACAAG CGACGGGGCC GAGAACGGCA TCCGCGCCAG CAACCGGGAT
ATCACCGATC GCAAGAAAGC CGAGGCGGCG GTGAAGGAGC AGGCGCTGCT GCTGGAAAAC
GAGGTGCGCG AGCGGATGGT GCGCGAGGTG GAACTGGAGG CGAAGAACGC TGAGTTGGAG
CGCTTCACCT ACACGGTCTC CCATGACTTG AAGAGCCCGC TCATCACCAT CAAGGGGTTC
GCGGGTGCGG TCCTTAAGGA CATCGAGGCC GGCAAGCTTT CGCGGCTCGA CTCCGACGTG
AAAAGGATCA TGGGGGCCGC CGACAAGATG GCAGCGCTTT TAAGCGATCT TCTGGAGCTC
TCCAGGATCG GCCGGATCAT GAACCCTCCC TCTAAGATCG ACCTGAACCT GCTGGCGCAG
GAGGTGCTGG GACAGCTCTC CGGCCCGATA TCGCAGGGCG GGGTGGAGGT GGTACTGCAG
CCGGGGCTGC CGGAAGTCTG GGGAGACGCC CCGCGCATCG CCGAGGTGCT GCAAAACCTG
GTGGAAAACG CGGTGAAGTA CATGGGGGAG CAACTGCAGC CGCTGGTGGA GATCGGCGTG
CGGGAAGGGG AGGGCGAGCA GGTGTTCTGG GTACGGGACA ACGGCATGGG GATAGCGGAG
CAGTATCGGG AAACCGTCTT CGGGCTCTTC AACAAGCTCG ACCCGCACTC GGAGGGTACC
GGGATCGGGC TCGCGCTGGC GCGCCGCATC GTCGAATTCC ACGACGGAAG GCTCTGGGTC
GAATCGGAAG GCCCGGGCCT CGGGAGCACC TTCTGCTTCA CGCTGGGCAA CAAGAGACCC
GATGCCGGTG ACACTGCTAT AAAAGGAGGG ACAACATGA
 
Protein sequence
MIKQKNRIRS FALLLAGFWT IAIAISFAWL YHHEKNSVVE VARAEARASF GKDTLFRRWG 
NWHGGVYVAV TEATLPNPYL AHIPERDITT PSGKRLTLIN PAYMMRQVFE LADGRGDMIR
GHITSLKPLR PENTPDAWEA NALRQFENGV QEVSEVQKVG DHEHLRLMRP FMAEEGCLKC
HGGQGYKVGD VRGGVSVSVS LENKEGYAKS AVGFGLLSYG MLWLFGMGLI LAGAGILSRN
LSILEQSEER YRTVADYTAD WEYWQGLDGS FKYISPSCKE ISDYSHDEFH DDPGLIERIV
HPDDQAALDD HAHAAKKGES HSLDFRIVRR DGEVRWISHV CQKVYTSDGA ENGIRASNRD
ITDRKKAEAA VKEQALLLEN EVRERMVREV ELEAKNAELE RFTYTVSHDL KSPLITIKGF
AGAVLKDIEA GKLSRLDSDV KRIMGAADKM AALLSDLLEL SRIGRIMNPP SKIDLNLLAQ
EVLGQLSGPI SQGGVEVVLQ PGLPEVWGDA PRIAEVLQNL VENAVKYMGE QLQPLVEIGV
REGEGEQVFW VRDNGMGIAE QYRETVFGLF NKLDPHSEGT GIGLALARRI VEFHDGRLWV
ESEGPGLGST FCFTLGNKRP DAGDTAIKGG TT