Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2259 |
Symbol | trpC |
ID | 8137599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2633577 |
End bp | 2634377 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869874 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_003022066 |
Protein GI | 253700877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC TCCCCGATGT GCTGAAGAAA ATAGTCGATT ACAAGCAGGG CGAAGTCGCC GCCATGAAGG CGGAAATGCC CTTGAACGAG ATCATGGACC GGCTCGCCGA ACTGGAGGAC CATCCCCGTG GGTTCCAGGC GGCGCTTATC AACTCGCTCT CCTCGGGATG GACCCCCATC ATCGCGGAGG TGAAGAAGGG GTCCCCGTCC AAGGGGCTGA TTCGCCCCGA CTTCGACCCG CTGCGGATCG CCCGGACCTA CCAGGAAAAC GGGGCCACCT GCCTCTCCGT CCTCACCGAC GAGCATTTCT TCATGGGGCA CCTGAGCTAC CTGGCCGCCA TCCGCGAAGA GGTGTCGCTC CCGCTCTTGC GCAAGGACTT CATCTTCGAC CCCTACCAGA TCTACCAGGC ACGCGCCGCC GGGGCCGACG CCATCCTCCT GATCGCCGCC ATGCTGGATC TCTCCCAGTT GCGCGACTTC GCCGCGCTGG CCCAGGAGCT CTCCATGGAC GTGCTCCTGG AGGTGCATGA CGAGAAGGAA CTGGAGACTG CCCTGCAGAC CGACTGCAGC CTGATCGGCA TCAACAACCG CGATCTGAGG AGTTTCGTGG TGGACATCGG CACCTCGGAG CGGCTGGCCG CGCTGGTGCC GCAGGGTCGC CTGGTGGTGG CGGAAAGCGG CATCAACAGG CGCGAGGAAA TCGTGCACCT CATGTCGAAG GGGCTGCACG CCTTTTTGAT CGGCGAGTCG CTGATGCGCG AGGAAGACTT CGGCGCGAAG CTGCGCGAAC TGCTGGGTTA A
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Protein sequence | MTQLPDVLKK IVDYKQGEVA AMKAEMPLNE IMDRLAELED HPRGFQAALI NSLSSGWTPI IAEVKKGSPS KGLIRPDFDP LRIARTYQEN GATCLSVLTD EHFFMGHLSY LAAIREEVSL PLLRKDFIFD PYQIYQARAA GADAILLIAA MLDLSQLRDF AALAQELSMD VLLEVHDEKE LETALQTDCS LIGINNRDLR SFVVDIGTSE RLAALVPQGR LVVAESGINR REEIVHLMSK GLHAFLIGES LMREEDFGAK LRELLG
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