| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2258 |
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| Symbol | |
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| ID | 8137598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2632192 |
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| End bp | 2633547 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644869873 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003022065 |
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| Protein GI | 253700876 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCA AGTTTATGCT CGATGAATCC CGCATCCCTA AACAGTGGTA CAACATCATC
CCCGACATGC CCGGGCCGCT GCATCCTGTC GTTAACCCGC AGACCCTGAA GCCGGTGACT
CCGGAGGACA TGACCGCCAT CTTCCCCATG TCGCTGATCG AGCAGGAGAT GTCGAACGAG
CGCTGGATCG ATATTCCCGA AGACGTGCGC GAGAAATACC GGCTCTGGCG GCCGGCCCCG
CTTTTCAGGG CCAGAAGGCT GGAGCAGGCG CTGCAGACCC CGGCGAAGAT CTACTACAAG
TACGAGGGGG TCTCGCCCGC CGGCTCCCAT AAGCCGAACT CCGCCATCCC GCAGGCCTAC
TACAACAAGC AGGCGGGGAT CCGCAGGCTC GCCACCGAGA CCGGCGCGGG GCAGTGGGGG
AGCTCGCTCG CGCTCGCCTG CTCCATGTTC GGCCTGGAGT GCACCATCTA CATGGTGAAG
GTCTCCTGCA CCCAGAAACC GTACCGAAAG AGCATGATGC AGCTTTGGGG TGCGACGGTG
ATCCCGTCCC CCTCCGAGTT CACCAACGCC GGGCGCTCGA TTCTGGCGCA CGACCCGAAC
AACCTGGGGA GCCTCGGCAT CGCCATCTCC GAGGCGGTGG AGGACGCCGC CACCCACGAC
GACACGAACT ACGCGCTGGG GAGCGTCTTG AACCACGTCT GCCTGCACCA GACCGTGATC
GGGCTGGAGG CGAAGGAGCA GATGGAGCTG GCCGGGGATT ACCCGGACGT GGTGATCGCC
TGCTGCGGCG GCGGCTCCAA CTTCGCCGGG CTCGCCTTCC CCTTCCTCTC CGACCGCGCC
AACGGGAAGC AGGTGCGCTG CCTGGCCGTG GAGCCGGCTT CCTGCCCGAC GCTCACCAAG
GGGGTCTACG CCTTCGATTA CGGCGATACG GCGAAGCTCG CCCCCATCAC CAAGATGTAC
ACCCTGGGGC ACGACTTCAT GCCGCCGGGG ATCCATGCCG GCGGGCTGCG CTACCACGGC
GAGTCCGCGC TCATCTCCCA GCTCTACCAC GCAGGCCAGA TCGAGGCGAA GTCGTACAAG
CAGAATGCCT GCTTCGAAGG GGCCCTGCTC TTCGCGAGGA GCGAGGGGAT CGTTCCGGCG
CCGGAATCCT CCCACGCGGT GCGCGCCGCC ATCGACGAGG CGGTGCTGGC CAAGGAGGAA
GGGAAGGAGA AAACCATTCT CTTCGGGCTT TCCGGTCACG GGCAGCTCGA CATGATGGCG
TACGACGCCT ATCTCTCCGG CGCGCTCGAG GACTTCGAGT ACCCCGAGGA GATGATCCGG
CAATCGCTGG AGCGGCTCCC CAAGGTGTCC TTCTAG
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| Protein sequence | MNTKFMLDES RIPKQWYNII PDMPGPLHPV VNPQTLKPVT PEDMTAIFPM SLIEQEMSNE
RWIDIPEDVR EKYRLWRPAP LFRARRLEQA LQTPAKIYYK YEGVSPAGSH KPNSAIPQAY
YNKQAGIRRL ATETGAGQWG SSLALACSMF GLECTIYMVK VSCTQKPYRK SMMQLWGATV
IPSPSEFTNA GRSILAHDPN NLGSLGIAIS EAVEDAATHD DTNYALGSVL NHVCLHQTVI
GLEAKEQMEL AGDYPDVVIA CCGGGSNFAG LAFPFLSDRA NGKQVRCLAV EPASCPTLTK
GVYAFDYGDT AKLAPITKMY TLGHDFMPPG IHAGGLRYHG ESALISQLYH AGQIEAKSYK
QNACFEGALL FARSEGIVPA PESSHAVRAA IDEAVLAKEE GKEKTILFGL SGHGQLDMMA
YDAYLSGALE DFEYPEEMIR QSLERLPKVS F
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