Gene GM21_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2254 
Symbol 
ID8137594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2627550 
End bp2628182 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID644869869 
Productisochorismatase hydrolase 
Protein accessionYP_003022061 
Protein GI253700872 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA GAGGAGCACT TCTTGTTGTC GACGCGCAGG TGGATTTCTG CCCGGGAGGG 
GCGCTCCCCG TACCCAGGGG AGACCAGGTT ATCCTGGCAC TGAACCGGTA TCTGGATCTC 
TTCAAGAGAA GAAGCGCGCC CATCTTCGCC TCGCGCGACT GGCATCCGAA GCTTAGCAAG 
CATTTCAAGG AAAACGGCGG CGAGTGGCCC GTCCACTGCG TCCAGGGGAC CCTCGGCGCC 
GAGTTCCACC CGTCACTGGT ACTTCCAAGC GACACCATCG TCATCTCCAA GGGGATGGCC 
TCCTGGGACG ACGGATACTC GGCCATGCAG GGGGTCACCG AGAACGGCAC CCCATTCGTC 
ATGCTGCTGC GGCACATGGA ACTGGACCGG CTCTACGTCG GGGGGCTCGC CACCGACTTT 
TGCGTGAGAC AGACGGTGCT CGAGGCGTTG AAGGCGGGAT TCGAGGTGAC CCTCCTGACC 
GATGCCGTGG GGGGGGTCGA CCTCAGGCCG GGGGATTCGG AGCGGGCCGT GGCGGAGATG 
ATCCACTCCG GCGCCGACAT CGCCACCCTC GCCTCGATCG GCACGAAGGT GGCGTGGGAT 
GGGGCGCCGC AGCGGCAGCA GGGACGCGGA TAG
 
Protein sequence
MQRRGALLVV DAQVDFCPGG ALPVPRGDQV ILALNRYLDL FKRRSAPIFA SRDWHPKLSK 
HFKENGGEWP VHCVQGTLGA EFHPSLVLPS DTIVISKGMA SWDDGYSAMQ GVTENGTPFV 
MLLRHMELDR LYVGGLATDF CVRQTVLEAL KAGFEVTLLT DAVGGVDLRP GDSERAVAEM 
IHSGADIATL ASIGTKVAWD GAPQRQQGRG