Gene GM21_2230 details

Gene Information

• Locus tag: GM21_2230
• Symbol: thrS
• ID: 8137568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 2600064
• End bp: 2601974
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644869844
• Product: threonyl-tRNA synthetase
• Protein accession: YP_003022037
• Protein GI: 253700848
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.00712554
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACGAGA TAAACGTCAC GCTACCGGAT GGTTCCCAAA GACCCCTGCC CGCAGGTGCC 
TCCATTTTCG ATCTCGCCGC ATCCATCGGA GCGGGGCTTG CCAAGGCGGC CATCGCCGGG 
AAGATCGACG GCAACCTGGT CGACCTCAAC ACACCTCTTG CCGACGGCGC CCGTGTCGAG 
ATCGTCACCG AGAAAAGCCC CGAGGCGCTT GAGATCATCA GGCACTCCAC CTCGCACCTT 
ATGGCGCAGG CCGTAAAGGC GCTCTTCCCG CAGGCGAAGG TGACCATCGG TCCCGCCATC 
GAGACCGGTT TTTACTACGA CTTCGACGTC GACCACCCCT TCACCCCGGA AGACCTCGAG 
AAGATAGAAG AAAAGATGCG CGAGCTCGCC AAGGCCGATC TCAAGATCGA GCGCAGGGAG 
CTCACCAGCG CCGACGCCAT AGCCCTCTTC AAGGGGATGG GCGAGGACTA CAAGGTCGAA 
CTGATCGAGG ACCTGGGGGC GGACAAGGTT TCGCTTTACA GCCAGGGCGA TTTCGTCGAC 
CTCTGCCGCG GGCCGCATCT CCCCAAGACC TCCTACATCA AGGCCTTCAA GCTCACCTCC 
ATAGCCGGCG CCTACTGGCG CGGCGACGAG AAGCGCGCCA TGCTGCAGCG CGTCTACGGC 
ACCGCCTTCG GCGACAAGAA GGAGCTCGAA GCCTATCTGG CCAGGATCGA AGAGGCGAAA 
AAGCGCGACC ACCGCAAGCT CGGCCGCGAA CTGGACCTCT TCTCCTTCAA CGACGAGGTC 
GGCGCAGGGC TCGTGATCTG GCACCCCAAA GGGGCTATGC TCCGCACCAT CCTCGAGGAC 
TTCGAGAGGA AGGAGCACCT AAAGCGCGGC TACGACATCG TTCTTGGTCC GCAGATCCTC 
AAGACCGAAC TCTGGCAGCG CTCCGGGCAC TACGAGAACT ACCGCGAGAA CATGTATTTC 
ACCACGGTGG ACGAGCAGAG CTACGGCGTG AAGCCGATGA ACTGCCTGGC CCACATGATG 
ATCTACCGCT CGCAGCTTCG CTCTTACCGC GACCTGCCGC TGCGCTACTT CGAGCTCGGC 
ACTGTGCACC GCCACGAGCG CGCCGGCGTT CTGCACGGCC TTCTGCGCGT GCGCGGCTTC 
ACCCAGGACG ACGCCCATAT CCTCTGCACC CCAGATCAGC TCGACGCCGA GATCAAAGGG 
GTCATCCAGT TCGTCACCGA GGTGATGGGT ATCTTCGGCT TCGAGTTCGA GATGGAGCTT 
TCCACCCGTC CCGAGAAGTC GATCGGCTCC GACGACGCCT GGGAGCTTGC CACGAGCGCT 
CTCCTGAACG CGCTCAAGGA CTCGGGCCGC CCTTACGAAA TCAACGAGGG GGACGGCGCG 
TTCTACGGTC CGAAGATCGA CATCAAACTG CGTGACGCGC TTGACAGAAG ATGGCAATGT 
GCTACAATCC AGTGCGATTT TACCCTCCCG GAGCGTTTCG ATCTCACCTA CGTCGACGCA 
GACGGTGAAA AGAAGCGCCC CGTCATGGTG CACAGGGTCA TCCTGGGCGC CATCGAACGC 
TTCATCGGTG TCCTCATCGA ACATTTCGCT GGAAACTTCC CGACTTGGCT GGCACCGGTT 
CAGGCGACCA TCGTTACGGT CACCGACAAC CAGATTCCGT ACGCGCAGGC GGCGTTCGAC 
AAGCTGCGCG CGGCCGGGAT AAGGGTGCAG AAAGATTTCA GGAACGAGAA GCTTGGCTTC 
AAGATTCGCG AAGCCCAGCT CCAGAAGATA CCGTACATGC TGGTGGTGGG GGACAAGGAG 
GTCGAGAGCG GCATGCTGGC GCCGCGATTC CGCGACGGCA AGAACCTCGA GTCCATGACC 
CCGGAGCAGT TCATTACTTT TATCGAAAAC GAAGTCAAAA GTTATAAATA A 

 

Protein sequence

MNEINVTLPD GSQRPLPAGA SIFDLAASIG AGLAKAAIAG KIDGNLVDLN TPLADGARVE 
IVTEKSPEAL EIIRHSTSHL MAQAVKALFP QAKVTIGPAI ETGFYYDFDV DHPFTPEDLE 
KIEEKMRELA KADLKIERRE LTSADAIALF KGMGEDYKVE LIEDLGADKV SLYSQGDFVD 
LCRGPHLPKT SYIKAFKLTS IAGAYWRGDE KRAMLQRVYG TAFGDKKELE AYLARIEEAK 
KRDHRKLGRE LDLFSFNDEV GAGLVIWHPK GAMLRTILED FERKEHLKRG YDIVLGPQIL 
KTELWQRSGH YENYRENMYF TTVDEQSYGV KPMNCLAHMM IYRSQLRSYR DLPLRYFELG 
TVHRHERAGV LHGLLRVRGF TQDDAHILCT PDQLDAEIKG VIQFVTEVMG IFGFEFEMEL 
STRPEKSIGS DDAWELATSA LLNALKDSGR PYEINEGDGA FYGPKIDIKL RDALDRRWQC 
ATIQCDFTLP ERFDLTYVDA DGEKKRPVMV HRVILGAIER FIGVLIEHFA GNFPTWLAPV 
QATIVTVTDN QIPYAQAAFD KLRAAGIRVQ KDFRNEKLGF KIREAQLQKI PYMLVVGDKE 
VESGMLAPRF RDGKNLESMT PEQFITFIEN EVKSYK