Gene GM21_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2196 
Symbol 
ID8137532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2565487 
End bp2566908 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content62% 
IMG OID644869811 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003022006 
Protein GI253700817 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.00405028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCAACG ATAACAAGCA CATCCAACGG ATTCTGCTGG TCGACGACGA AGCGCAGATA 
CTGGAAACCT GCCGGAGCTG CCTCAAGAAC GCCGGGCACG CCGATGTCGC CGTCGAAAAC
GACAGCAGCA AGGTGATGTC GCTTCTCTCC AGGGAAGAGT TCGCCGTCAT CGTCCTCGAC
CTGCGCATGC CGAACCTCTC CGGGTTCGAA CTCCTGCCGC AGATAATCTC GCAATACCCC
CAGATCAAGG TGATAGTCGC CACCGCCAAC AACGACGTCG AGACCGTGGT GAACTGCATC
AAGGAGGGGG CCTTCGACTA CTTGGTGAAG CCCATCGACG TGAAGCGGCT GATTACCTCG
GTAAGGAAGG CCTTGGAGCT GCGTTCGCTC GCCAACGAAC TGACCGCGCT GAAACAGTAC
ATGTTCACCG ACCGGCTGGA TCATCCCGAG GTCTTCCAGG ACATCGTCAC CGGCAACAAG
GCGATGCGGG CCATCTTCCA ATATCTGGAG GTCATCTCAG GAACCAGGCA GGCGGTCACC
ATAACCGGCG AGACCGGCAC CGGGAAGGAG CTGATCGCCC GCGCCATCCA CAACCTGAGC
GGCTGCAGCG GCGAGTACGT GGCGCTCAAC GTGGCGGGGC TCGACGACAA CATGTTTTCC
GACACCCTCT TCGGTCACCG CAAGGGCGCC TTCACCGGCG CCGACCAGGC CAGGGACGGT
CTGATCACCC GCGCCTGCGG CGGGACGCTC TTTCTGGACG AGATCGGCGA CCTGAACGAG
ATGTCGCAGA TCAAGCTCTT GAGGCTTTTG CAGGAGCAGG AATACTACCC CGTCGGCTCC
GACTTCATCA AGAAGAGCGA CGCGCGTCTC GTGCTCGCCA CCAACCGCGA CCTTCAGGAG
ATGATCAAGC AGGGGAAGTT TCGCAACGAC CTCTACTACC GGCTCTGCGG GCACCGGGTG
CATCTCCCCC CGCTGCGGGA GAGGCTGGAC GACATTCCGC TTCTTTTGGA GCACTTCCTG
GGAAGCGCCG CCGACTGCCT GGGGAAGAAG AAGCCGACCC CTCCCCCCGA GCTTGCCGTC
ATGCTCGCCT TGTACCACTT CCCCGGCAAC ATCCGTGAGC TGGAGGCGCT CGTGTTCGAC
GCCGTCTTGC GGCACAACTC CGGCATCCTC TCCATGGAGA CCTTCCGCGG CGTCATCGGC
CACGAGCGGC CATTGCCGAC GCTCGACTGC TCCCCCCCGG CTGCCGCCGG CGAGAATCCG
CTCTGCGGCA TCTTCGGGCA CTTCCCGACT TTGGACGAAG TGGAACAGTA CATGATCGCC
GAGGCGATGA AGTTGGCCAA GGGGAACCAG GGGCTAGCCG GAAGGATCCT GGGCATGGGG
CGTCAGACCC TGAACAAGCG GCTGAAGCTG CAGGCGTCGT AG
 
Protein sequence
MINDNKHIQR ILLVDDEAQI LETCRSCLKN AGHADVAVEN DSSKVMSLLS REEFAVIVLD 
LRMPNLSGFE LLPQIISQYP QIKVIVATAN NDVETVVNCI KEGAFDYLVK PIDVKRLITS
VRKALELRSL ANELTALKQY MFTDRLDHPE VFQDIVTGNK AMRAIFQYLE VISGTRQAVT
ITGETGTGKE LIARAIHNLS GCSGEYVALN VAGLDDNMFS DTLFGHRKGA FTGADQARDG
LITRACGGTL FLDEIGDLNE MSQIKLLRLL QEQEYYPVGS DFIKKSDARL VLATNRDLQE
MIKQGKFRND LYYRLCGHRV HLPPLRERLD DIPLLLEHFL GSAADCLGKK KPTPPPELAV
MLALYHFPGN IRELEALVFD AVLRHNSGIL SMETFRGVIG HERPLPTLDC SPPAAAGENP
LCGIFGHFPT LDEVEQYMIA EAMKLAKGNQ GLAGRILGMG RQTLNKRLKL QAS