| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2169 |
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| Symbol | |
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| ID | 8137505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2533277 |
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| End bp | 2535418 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644869784 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003021979 |
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| Protein GI | 253700790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 127 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAAAAG GACCGGACAA AAAACTGTTC GAGGATCTGC TGGCGGGGCT GAAGAGCCTT
CCCGCGCTGG CGCCCTACAG CCTTACCCTT TATTGCCGTA AGCCTTCTCG CGGAGAATTC
GAGAACTGCT CTTCCCTAGT AGAAGACGCG CTTTGCAGGG ACGTGGCGCA GCAGTTTTTC
GAACCGAACA TGGAGGTGTA CTTCCTGGAG GGAACCACCT CGGTCTGTCG CTACGGCGGC
GGCTTCTTCG GCTTTGTCAT CCCCTTCCAG ATCGGGAGCG ACGAATTCTG CCTGGTGGGA
GACGGCGTGA GGGACGATTC CATCGACCTC TGGCAGCTTG CCGCCCTGGC CCGCTCCGGC
GGCGGCGAAG TCTTTTCGCT GTTTCCGTAC GTGGAATCGC TTTGCACCGC GTCCCTTGCC
GATGTCGAGC AGGTAGCCCA TGAACTCGCC CAAGAGGTCG CAAAGCGGGT AGAAAAACTT
TCCTTGGCTC CGCAGGCTCC CCCCCTCCTC CCCTCCTCCT CAGCCGCCGC CGGCGAACCG
GGCGAGGAGC ATTGCGACCC AAGGCTTGAC GCCGTGGCCC GCTCGCTGGA GGAGCTCGAT
CAGGCGAATA CGGTAACCGA GACCATTGGG CTTTGCTGCG AAACCCTGAT CACCCATTTC
AACTCGCCCA AAACCGCCAT AGCGCTCAGG GACGCCTCCG GCACCTCCTT CCAGGTCAGC
GGAGTCTGGG GACTCCCCGA GGATCTCGGC AGCATCCCAG CCGACTCCAT CCACCTCTTC
ATCGCGAAAG ACCGCCGGGC GAAGACGGTG ATCTTCGACG CGCAGATGCG CGGCGTGCTC
CCCGCCCTGC AGGCGACCGT CTGCACCTGT TTCCCGCTGC GCTGCCAGGA CGAGCGACTG
GGGTTTGTGG CCCTGTTCGA CGTCGCCCCC ACGAAAAGCG ACGCCCTGCT CCTCTCCATG
CTCGCCGGCG CCACGGCCGC AAAGCTTTCA CGCATCATAA AGGATGCGGA GCAATCCAAG
GAGAACGCCC TTTCCCAGCG GCTCATGTCG CTGACCAACA CTCTGCTGCA GGTGGACAGC
AAGGACGAGC TATACCAGGC CATCCTCGAG ATCGCCGCGG AGCTTATCGA CGCGACGCAG
GGGTCCGTCA TGCTGATCGA CAAGGACGGA CAGAACATGC ACATCGTCTT CACGCTGGGC
ATGACCCTCA ACGTCGCGCG CTGCCTCCCG GTCAAGGTAG GCAAGGGGAT AGCGGGAATG
GTGGCGCAAT CGGGCCAGCC CCTGTTGATC AACGACGTGG AGAAGGACAG CCGGGTCGCC
ATGGCCAACA GGCTCCGTTT CAAGTCGAAA TCGCTCATCT GCATGCCGCT CAAGCTCAAA
GACAAGATCA TCGGCGTCTT GAACCTCTCC GACAAGAAGA ACCTCGCGCC CTTCACCGAC
GCGGACCTGC AGGTGCTCAC CTCCTTCGCC AACCTGGCGT CGCTGATGAT CGAGCGGACC
GAGGTGCTGG AGGAGTCCGA GCGTTTCGAG CAGCTTTCGG TCACCGACGC GCTGACCGGG
CTTTACAACC GCCGATTCCT GAAGAACCGG CTCGAGGAGG AACTGAACCG AAGCATCCGG
CAGGGACTGA ACCTCACCGT CATCTTCATC GACCTGGACT TCTTCAAAAA CTACAACGAC
CTCTGCGGGC ACTTAGCTGG AGACGACGCC CTGAGGATCA CAGCGGAAAT AATCAAGGCC
TCGCTGCGCG ACATGGACAT CGTGGCCCGC TACGGCGGAG AGGAGTTCTG CGCGGTGCTC
CCCGGGACCT CGAAGGTGGA GGCGATGATC GTCGCCGAGC GGATCAGGTC GGAGATAGAG
AGGGAAAAAT TCCCCGGCGA AAGCGAGATA CCGCAGGTCC GCCTCACCGC GAGCCTCGGG
GTCGCCTCGT TCCCCGAAGA CGGCCGCACC TTCACCGCCC TGGTGCACGC CTCCGACGTC
GCCTTGTACG AGGCGAAGGC CGGCGGCCGC AACCGCATCG TCGCCGCCCG CACCTCCCCC
GGACAAAAAG AGACGCCGAT CCCCGCGACC TCCCCCGCCA AAACGGCCAA GACCCTCGAC
TTCAACGCCT ACCTCGAAGC CTCGGCGGGC GCTAAGGGAT AG
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| Protein sequence | MGKGPDKKLF EDLLAGLKSL PALAPYSLTL YCRKPSRGEF ENCSSLVEDA LCRDVAQQFF
EPNMEVYFLE GTTSVCRYGG GFFGFVIPFQ IGSDEFCLVG DGVRDDSIDL WQLAALARSG
GGEVFSLFPY VESLCTASLA DVEQVAHELA QEVAKRVEKL SLAPQAPPLL PSSSAAAGEP
GEEHCDPRLD AVARSLEELD QANTVTETIG LCCETLITHF NSPKTAIALR DASGTSFQVS
GVWGLPEDLG SIPADSIHLF IAKDRRAKTV IFDAQMRGVL PALQATVCTC FPLRCQDERL
GFVALFDVAP TKSDALLLSM LAGATAAKLS RIIKDAEQSK ENALSQRLMS LTNTLLQVDS
KDELYQAILE IAAELIDATQ GSVMLIDKDG QNMHIVFTLG MTLNVARCLP VKVGKGIAGM
VAQSGQPLLI NDVEKDSRVA MANRLRFKSK SLICMPLKLK DKIIGVLNLS DKKNLAPFTD
ADLQVLTSFA NLASLMIERT EVLEESERFE QLSVTDALTG LYNRRFLKNR LEEELNRSIR
QGLNLTVIFI DLDFFKNYND LCGHLAGDDA LRITAEIIKA SLRDMDIVAR YGGEEFCAVL
PGTSKVEAMI VAERIRSEIE REKFPGESEI PQVRLTASLG VASFPEDGRT FTALVHASDV
ALYEAKAGGR NRIVAARTSP GQKETPIPAT SPAKTAKTLD FNAYLEASAG AKG
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