Gene GM21_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2169 
Symbol 
ID8137505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2533277 
End bp2535418 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content63% 
IMG OID644869784 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_003021979 
Protein GI253700790 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones127 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAAAAG GACCGGACAA AAAACTGTTC GAGGATCTGC TGGCGGGGCT GAAGAGCCTT 
CCCGCGCTGG CGCCCTACAG CCTTACCCTT TATTGCCGTA AGCCTTCTCG CGGAGAATTC
GAGAACTGCT CTTCCCTAGT AGAAGACGCG CTTTGCAGGG ACGTGGCGCA GCAGTTTTTC
GAACCGAACA TGGAGGTGTA CTTCCTGGAG GGAACCACCT CGGTCTGTCG CTACGGCGGC
GGCTTCTTCG GCTTTGTCAT CCCCTTCCAG ATCGGGAGCG ACGAATTCTG CCTGGTGGGA
GACGGCGTGA GGGACGATTC CATCGACCTC TGGCAGCTTG CCGCCCTGGC CCGCTCCGGC
GGCGGCGAAG TCTTTTCGCT GTTTCCGTAC GTGGAATCGC TTTGCACCGC GTCCCTTGCC
GATGTCGAGC AGGTAGCCCA TGAACTCGCC CAAGAGGTCG CAAAGCGGGT AGAAAAACTT
TCCTTGGCTC CGCAGGCTCC CCCCCTCCTC CCCTCCTCCT CAGCCGCCGC CGGCGAACCG
GGCGAGGAGC ATTGCGACCC AAGGCTTGAC GCCGTGGCCC GCTCGCTGGA GGAGCTCGAT
CAGGCGAATA CGGTAACCGA GACCATTGGG CTTTGCTGCG AAACCCTGAT CACCCATTTC
AACTCGCCCA AAACCGCCAT AGCGCTCAGG GACGCCTCCG GCACCTCCTT CCAGGTCAGC
GGAGTCTGGG GACTCCCCGA GGATCTCGGC AGCATCCCAG CCGACTCCAT CCACCTCTTC
ATCGCGAAAG ACCGCCGGGC GAAGACGGTG ATCTTCGACG CGCAGATGCG CGGCGTGCTC
CCCGCCCTGC AGGCGACCGT CTGCACCTGT TTCCCGCTGC GCTGCCAGGA CGAGCGACTG
GGGTTTGTGG CCCTGTTCGA CGTCGCCCCC ACGAAAAGCG ACGCCCTGCT CCTCTCCATG
CTCGCCGGCG CCACGGCCGC AAAGCTTTCA CGCATCATAA AGGATGCGGA GCAATCCAAG
GAGAACGCCC TTTCCCAGCG GCTCATGTCG CTGACCAACA CTCTGCTGCA GGTGGACAGC
AAGGACGAGC TATACCAGGC CATCCTCGAG ATCGCCGCGG AGCTTATCGA CGCGACGCAG
GGGTCCGTCA TGCTGATCGA CAAGGACGGA CAGAACATGC ACATCGTCTT CACGCTGGGC
ATGACCCTCA ACGTCGCGCG CTGCCTCCCG GTCAAGGTAG GCAAGGGGAT AGCGGGAATG
GTGGCGCAAT CGGGCCAGCC CCTGTTGATC AACGACGTGG AGAAGGACAG CCGGGTCGCC
ATGGCCAACA GGCTCCGTTT CAAGTCGAAA TCGCTCATCT GCATGCCGCT CAAGCTCAAA
GACAAGATCA TCGGCGTCTT GAACCTCTCC GACAAGAAGA ACCTCGCGCC CTTCACCGAC
GCGGACCTGC AGGTGCTCAC CTCCTTCGCC AACCTGGCGT CGCTGATGAT CGAGCGGACC
GAGGTGCTGG AGGAGTCCGA GCGTTTCGAG CAGCTTTCGG TCACCGACGC GCTGACCGGG
CTTTACAACC GCCGATTCCT GAAGAACCGG CTCGAGGAGG AACTGAACCG AAGCATCCGG
CAGGGACTGA ACCTCACCGT CATCTTCATC GACCTGGACT TCTTCAAAAA CTACAACGAC
CTCTGCGGGC ACTTAGCTGG AGACGACGCC CTGAGGATCA CAGCGGAAAT AATCAAGGCC
TCGCTGCGCG ACATGGACAT CGTGGCCCGC TACGGCGGAG AGGAGTTCTG CGCGGTGCTC
CCCGGGACCT CGAAGGTGGA GGCGATGATC GTCGCCGAGC GGATCAGGTC GGAGATAGAG
AGGGAAAAAT TCCCCGGCGA AAGCGAGATA CCGCAGGTCC GCCTCACCGC GAGCCTCGGG
GTCGCCTCGT TCCCCGAAGA CGGCCGCACC TTCACCGCCC TGGTGCACGC CTCCGACGTC
GCCTTGTACG AGGCGAAGGC CGGCGGCCGC AACCGCATCG TCGCCGCCCG CACCTCCCCC
GGACAAAAAG AGACGCCGAT CCCCGCGACC TCCCCCGCCA AAACGGCCAA GACCCTCGAC
TTCAACGCCT ACCTCGAAGC CTCGGCGGGC GCTAAGGGAT AG
 
Protein sequence
MGKGPDKKLF EDLLAGLKSL PALAPYSLTL YCRKPSRGEF ENCSSLVEDA LCRDVAQQFF 
EPNMEVYFLE GTTSVCRYGG GFFGFVIPFQ IGSDEFCLVG DGVRDDSIDL WQLAALARSG
GGEVFSLFPY VESLCTASLA DVEQVAHELA QEVAKRVEKL SLAPQAPPLL PSSSAAAGEP
GEEHCDPRLD AVARSLEELD QANTVTETIG LCCETLITHF NSPKTAIALR DASGTSFQVS
GVWGLPEDLG SIPADSIHLF IAKDRRAKTV IFDAQMRGVL PALQATVCTC FPLRCQDERL
GFVALFDVAP TKSDALLLSM LAGATAAKLS RIIKDAEQSK ENALSQRLMS LTNTLLQVDS
KDELYQAILE IAAELIDATQ GSVMLIDKDG QNMHIVFTLG MTLNVARCLP VKVGKGIAGM
VAQSGQPLLI NDVEKDSRVA MANRLRFKSK SLICMPLKLK DKIIGVLNLS DKKNLAPFTD
ADLQVLTSFA NLASLMIERT EVLEESERFE QLSVTDALTG LYNRRFLKNR LEEELNRSIR
QGLNLTVIFI DLDFFKNYND LCGHLAGDDA LRITAEIIKA SLRDMDIVAR YGGEEFCAVL
PGTSKVEAMI VAERIRSEIE REKFPGESEI PQVRLTASLG VASFPEDGRT FTALVHASDV
ALYEAKAGGR NRIVAARTSP GQKETPIPAT SPAKTAKTLD FNAYLEASAG AKG