| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2135 |
|---|
| Symbol | |
|---|
| ID | 8137471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2492626 |
|---|
| End bp | 2493483 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644869750 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003021945 |
|---|
| Protein GI | 253700756 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0000451795 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGT CGTGCGAGAA GATGAAGAAG ATCCAGGGGC ATCCCTGCTT TGGCGGCAAC
CACCACAAAA ACGGCCGGAT GCACCTCGCA GTGGCGCCCA AGTGCAACAT CAAATGCGGC
TACTGCACCC GGCTTCACGA CTGCGCCAAC GAGTCGCGCC CTGGCGTCAC GAGCCGCCTG
CTCACGCCGG AGGAGGCGAT CGTCAGGGTG AGGGAGGTGA TGGCGAGCCC CATCACCGGT
CCCATCATCA AGGTCATCGG CATCGCGGGA CCGGGGGATC CGCTCTTCAA CGAGGAGACC
TTCGACACCT TCCGTTACGT GGACCGTGAG TTCCCGCAGT TGATCAAGTG TCTGAGCACC
AACGGGCTGC TGCTCCCCGA CAAGATGCCG GTGCTTAAAG AGATAGGGCT GCACAGCCTC
ACCGTCACCC TCAACGCGTT GGATCCTAGA ATCGGCGCGA AGATCTATTC TCACGTCTTC
TATGAGGGGA TCAAATACGT AGGCGAAGAG GGGGCGGAGA TCCTGGTTCG TAACCAGTTG
GATGGGATTC GGCAGGCGGC GGAGCTGGGA ATGACCATCA AGATAAACAC GGTGCTTGTA
CCCGGCGTCA ACGACGGGCA GATCCCGCTC ATCTCGAAGA AGGTGAAGGA TCTGGGCGCC
TTCGTGATGA ACATCATGCC TCTCATCCCG CAGGCGGACT TCGCTCATAT CGTGCCTCCT
ACAGCAGAGG CGCTGGATGC GCTGCGCCAG GCCAACGAGA AGACCATAGG GCAGTTCAAG
CACTGCAAGC AGTGCCGTGC CGATGCGGTG GGACTTATCG GCGAAAACCT GCAGCTCGCC
ATCGCCCCGG CGGCGTAG
|
|---|
| Protein sequence | MATSCEKMKK IQGHPCFGGN HHKNGRMHLA VAPKCNIKCG YCTRLHDCAN ESRPGVTSRL
LTPEEAIVRV REVMASPITG PIIKVIGIAG PGDPLFNEET FDTFRYVDRE FPQLIKCLST
NGLLLPDKMP VLKEIGLHSL TVTLNALDPR IGAKIYSHVF YEGIKYVGEE GAEILVRNQL
DGIRQAAELG MTIKINTVLV PGVNDGQIPL ISKKVKDLGA FVMNIMPLIP QADFAHIVPP
TAEALDALRQ ANEKTIGQFK HCKQCRADAV GLIGENLQLA IAPAA
|
|---|
| |