| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2113 |
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| Symbol | |
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| ID | 8137449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2457146 |
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| End bp | 2464477 |
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| Gene Length | 7332 bp |
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| Protein Length | 2443 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644869728 |
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| Product | polyketide-type polyunsaturated fatty acid synthase PfaA |
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| Protein accession | YP_003021923 |
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| Protein GI | 253700734 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00517] acyl carrier protein
[TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACTG ACGATCTGAA GCCGGCCGCC TCCAGTAACG GAACTCAGCT TGCCATCATC
GGCATCGGTT GCCTTTTTCC CAAGGCCGAC GACCGTGACG CGTACTGGGC CAACATCGCC
GATGGGATCG ACGCCATCAC CGAGGTCCCC GAGACCCACT GGCCGGTGGA CGCCTACTAC
GACGCAAACC AGAAGAGCCC GGACCGCACC TACGGCCGGC GGGGTGGCTT CCTCTCCCCC
GTCGACTTCA ATCCGATGGA GTTCAACATC CCCCCCAACG TCCTGGAGGC GATCGACACC
TCCCAGCTTT TGGGGCTCGT CGCTGCCGGA CAGGCGCTGA AGGACGCGGG GTACGGCCCC
GAGCGCAGCT TCGACAAGAG CCGCGCTTCG GTCATCATCG GGGTCACCGG CACGCTGGAG
CTGGTGATAC CGCTCGGCGC GCGGCTGGGC CACCCGATCT GGCGCTCGGC CTTGAAGGAC
GCGGGCGTCG ACGAGGCAAC CGCCAACGAC GTCGTGGAGC GGATCTCCGA CTCCTACGTC
CCCTGGCAGG AAAACTCGTT CCCGGGTCTT CTGGGCAACG TGGTCGCCGG CCGCATCAGC
AAGCAATACG ACCTGGGCGG GACCAACTGC GTCGTCGACG CTGCCTGCGC CAGCTCCTTC
AGCGCGCTGC ATCTCGCCTC CATGGAGCTT GCCTCCGGCA AGTCCGACAT CGTGGTGACC
GGCGGCATCG ACACCTTCAA CGACATCTTC ATGTACATGT GCTTCAGCAA GACCCCCGCC
CTGTCACCTA GCGGCAACGC GAAGCCGTTC GACGTTTCCG CCGACGGGAC CATTCTCGGC
GAGGGGCTCG GGCTCGTGGT CATTAAGCGG TTGGCCGACG CCGAGCGCGA CGGCGACAGG
ATCTACGCGG TGGTGCGCGG CGTCGGTTCC TCCAGCGACG GCAAGGGTGA CGCGATCTAC
GCCCCGAGCG CCGCGGGCCA AAAGAACGCG CTTTTAAACG CCTACAAGAA CGCCGACGTC
ACGCCGCAGA GCATCGGCCT GATCGAGGCC CACGGCACCG GCACCAAGGT GGGGGACGCT
GTCGAGGTGA GCGCACTGCG CGACGTATAC GGCGAGTCGG AGCTCCCCTG GTGCTGCCTC
GGCTCGGTCA AGTCCCAGAT CGGCCACACC AAGGCCGCCG CAGGTTCCGC AGGTCTCATC
AAGGCGGCGC TCGCGCTGCA CCACAAGGTG ATCCCCCCGA CCATCAAGGT GCAGACCCCG
CAAAAAGAGG TGGTCGGGGA GAAGTCCCCC TTCTATCTCG CCAAGGAGAA GCGCCCCTGG
TTCCCGCGCG CCGACGTACC GCGCCGCGCC GCCGTCAGCG CCTTCGGTTT CGGCGGCTCC
AACTTTCACG TGGTCCTTGA GGAATACCGG GCCGACAAGA AGGCGGCCGA CTGGGACGGC
AACACCCAGA TCCTCGCCTT TTCCGGCGCC GACGCCGCGA GGCTTGCCGC CGGGCTCGAC
CGGGTGCCGG CGGACGCTGC CTGGAGCGCC GTCAGGGAGC TGGCCTTCCA GACCCGCGCG
AGCTTCGACG CGAAGGGGGC GCTGCGCCTT GCCTTGGTGA TCGAGCGCGG CCGCACCAAC
GTCGCCTCGC TGGTGAAGAA CGCGAAGGCC ATGCTGGAGA AGAACTCGAA ATCCGCCTGG
CAGACCCCCG ACGGGGCCTT CTTCGGTTGC GGCGCCGCCG GCAAGCTCGG CATGCTCTTC
CCGGGGCAGG GCTCCCAGTA CACCGGGATG CTGAACGATC TCGCCTGCCG CTTCCCGCAG
CTCTTGAACG CGGTCACCGC CGCCAACGAA GGTTTCACTT CCGCCGGCGG CAGGAGGCTT
TCCGACCTCA TCTACCCCCC TTCCGCCTTC GACGAAGAGA CCCGTTCCAA GCAGGAGGAG
GCCCTGCGGG CGACCCAGGC GGCGCAACCG GCCATCGGCG CCGTGAGCCT CGGCGCGCTA
CGCCTCATGC AGTCCTTCGG CCTTGAGCCG GAAGCTGTCG CCGGCCACAG CTACGGCGAG
CTGACCGCCC TCTGCGCCGC TGGCCGCTTA GACGAAAGCG CCCTGCACGC CCTGTCGCGC
CTGCGCGGAG AGCTGATGGG CGCGGGCAAA GGGGACAAGG GGAGCATGCT CGCCGTCTCC
GCGCCGCTTT CGAAAATCGC CGAGGTGGTA GCGGCCGAGA AGCTGGACCT CGTGATCGCC
AACAAGAACG CCCCCTCGCA GGCGGTCCTT TCCGGCGCCT GCGCCCAGAT CAAGCGGGCC
GTCGAGCTCT TCAAGGGACG CGGACTCACC TGCAAGGAGC TTCCGGTCGC AGCAGCTTTC
CACAGCACGC TTGTCGCCGA CGCCGCCACG CCGTTTCTGG CCGCGCTCGC CAAGATCGAG
ATGCATAAGG CGAAGATCCA GGTCTTCGCC AACACCACGG CCGCCGTCTA CCCTGCCGAC
GCCGCAGCCG CCAAGGCGCA GCTCGCTTCC CAGCTCGCCA TGCCGGTGGA GTTCGTGGCG
GAGATAGAGG CGATGTACGC GGCGGGCATC ACCAGCTTCG TGGAAGTCGG CCCCGGCAAC
AGGCTCACCG GCTTGGTGCA AGCCATCCTC GCCGACCGTC CGCACTCAGC CGTAGCCCTC
GACGCCTCCT CGGGCAAGCG CGCAGGCGTG GCCGACCTGG GCCGCACCTT GGCGCAACTG
GCGGTGCTCG GTTTCGGCGT GAAGCTCGCC TCCTGGGACG AGGGTTATCG CCCGGCTCCC
GCAGGGAAAA AGCCGCTTTT GAGCATTCCC CTCTGCGGCG CCAACTACCA AAAACCCAAA
CCGAAGAAGC CGCCGGTCCA GCCCAAGCCC GCAGTAGTGG CTGCAGCAGC CGCTCCCCAG
GCGGCACCAG TCGCCATGAA CGCGCCTGCT GCACAGCCGC CCGCTTACCA GGCTGCAGTT
GCTGCGCCCC GGGAAGCTAT CTTCCAGGCC GCTCCGTCCG CCGCCGCAGC ACCGCAGGCG
GCGCTGAGCG AATCGCTGCG CCTGGCGCGC GAAGGGATGG CGGTTCTGCA GCGGATGCAG
GAGGATACGG CGCAGTTGCA CCGCCGTTTC CTCGAAGGGC AGGAGACCGC AACCAGGACC
TTCCAGACCC TGCTCCAGCA GCAGCAACAG TTGATTCTAG GCGCCTCCAT CTCCCCCGCC
GCAGTGGCTC CGGCGACCGT GCCGGTTCAG GCGCAGGCGC AGGCTTACGT CGCTCCGGCT
CCGGTCGTCG CGCCCGCCGC ACAAGTAACC GCCCCGGCGG CAAAAGCTCC CGTCGCACCG
GCAGCTCCGG CAGCTCCGGC AGTCGCCGCC TCGCCCGCTC CGGCAGCCCC GGCTCCCGCG
TCAGTCGGAG CCGATTCGGC GCGCATCACG CAGGTGCTCC TGGCCGTGAT CGCCGAGAAG
ACCGGGTACC CGGTCGAGAT GCTGGAACTC GACATGGGGA TGGACTCGGA CCTGGGGATA
GATTCGATCA AGCGCGTCGA GATCCTCTCC ACGCTGCAGG AGCGCCTCCC CGGGACCCCG
GCCATCGGCC CCGAGCACCT GGGGACGCTG CGCACCCTGG GCGACATCGC CGGGCACCTC
TGCGCTTCGA CAGCGGCCTC GGCCCCGGCA GCGGTAGCAA CCGCGGCGCC CGCCGCCGCT
ACTTCCGGGC TCGCAGCCGA GCAGATCACC AGCACGCTTC TCTTAGTAGT CGCCGAGAAG
ACGGGCTATC CGGTTGAGAT GCTTGAATTC GACATGGGCA TGGACTCGGA TCTCGGGATC
GATTCGATCA AACGGGTCGA GATACTCTCC ACCCTGCAGG AGCGTCTTCC CGGCTCCCCC
GCGATAGGTC CCGAGCACCT GGGGACCCTG CGCACCCTGG GGGACATCGC CGGGTTCCTC
TCCGCCTCGG CAGTTTCCGC CCCGGCAGCG GCAGCGGCAC CCGCCGTCGC CACCGGATCC
GCCATCGCCG CCGGCGAGAT CACCAGCACC CTTCTCTTAG TAGTCGCCGA AAAAACCGGC
TACCCCGTGG AGATGCTGGA ACTCGACATG GGAATGGACA GCGACCTCGG CATCGACTCC
ATCAAGCGCG TCGAGATCCT CTCCACGCTG CAGGAGCGCC TCCCCGGCAC CCCGGCCATT
GGCCCTGAGC ACCTCGGCAC GCTGCGCACC CTGGGGGACA TCGCCGGATT CCTCTCCGCC
TCGGCAGTTT CCGCCCCGTC CGCAGCCTCC GCCCCTGCCG TCGTCACCGG TTCCGCCGTT
GCCGCCAGCG AGGTTACAAG CACCCTTCTC TCCGTGGTCG CCGAGAAAAC CGGCTACCCC
GTGGAGATGC TGGAACTCGA GATGGGTATG GACAGCGACC TCGGGATCGA CTCCATCAAG
CGCGTCGAGA TCCTCTCCAC GCTGCAGGAG CGCCTCCCCG GCACCCCGGC CATAGGTCCC
GAGCACCTGG GTACTCTGCG TACCCTGGGC GACATCGCGA CCTACCTCGC TGCCGGTTCG
GCCACGGCCG CACCCGCCGG CGCTGGCGGA GCCAGTCCCC TTGCCGCTTC GGCGGCCGCA
CCGGCGCAGC CCGTAGCACC TCCGGCCGCC GCCTCCAGCG ACCCGGCTCG CATCATGACG
ACGCTCCTTG AGGTAGTCGC CGACAAGACC GGCTACCCCG TGGAGATGCT GGAGCCGGGA
ATGGGGATGG ACAGCGACCT CGGCATCGAC TCCATCAAGC GCGTCGAAAT CCTCTCCACG
CTGCAGGAGC GGCTTCCCGA CACACCCGCC ATAGGCCCCG AGCACCTGGG GACCCTGCGC
ACCCTGGGCG ATATCGCCGA TTTCCTGGTC GGGGCTTCCA GCGCTGCGGC ACCCGCCGCT
GAAGGGGCTG CCGCTGCCGC CACCGCTGCT GCCGTCGAGG CAAACCAGGC AGTTGCCGCG
GAACCGGTTC CGGCTCCGGT CCAGGCTATC GAGCGCAGCA GCGTCACCCC TGTCGAGCTT
TCGGCTGACG AGGAGGGGGA GGCAATCGTT CTCGCCAACG ACGGGGAGAT CTGGGTCACC
GACGACGGCT CGGCGTTCGC CTCCGAGCTT TGCGGCATTC TCCTGGAGCA CGGCTGCTCG
GTCCGCAAGG TGAACGCGGC CGAGGCCCAG CAGACCGCGC CCGCTGGGAA GCTCTCCGGC
CTGGTGATCT GCGCGCCGAT GTCGGGCACC GACGACATTT TCCTCGAAAA CGCCTTCCAA
CTGGTAAAGA ACGCGGCCGG CGCCCTGAAC GAGTCGGCTC GCGCCGAAGG GGCCGTCTGC
GTCACCGTCT CACGTCTGGA TGGGGCCTTC GGTTTCGGCT CCGGCAAGAG CATCAAGGAT
CCGCTCTCCG GCGGACTGGC AGGGCTCGCC AAGACGGCGG CGCTGGAATG GCCGGAAGTC
TCCTGCAAGG CGATCGACCT GGGCGAGTTC CCGCATGCGG CTGCCGCCGC CGGCGCCGTC
GCCATCGAGA TGCTGCGCCG CGGTCCGGTC GAGGTAGGCC TCTCCAGCAA AGGGCGCTTC
GCGCTGCAAA CGGTGGTGCT CCCCTGTGCA CCGGCTCCGG CGGAACCCGC TATCAAGGCC
GGTGACGTGG TGGTAATCAC CGGCGGCGGG CGCGGCGTAA CAGCGATCTC CGCCCTGGCG
CTCGCCAAGG AGTACAAGCC GTTCCTGGTG CTCCTGGGTC GCAGCTCCGA GCCCGAGGAG
GAGGCAGCCT GGCTTGCCGG CGTCTCCGGC GAGGCCGAGA TCAAGCGCGT CATCATGCAG
AACGCGGTAG GGAAGCTCCA CCCGCGCGAG ATCGAGGAGC GCTACCGTGC CGTCGTGGCC
GGGCGCGAAC TGCGCGACAC CCTGCAGAAA ATCTCCGCCG TCGGCGCCGA GGCGATCTAC
CGCTCGGTCG ACATCCGCGA CCGCAGCGCC ATGGAACTCC TCCTGGGCGA GGTGCGGCGC
GCCCATGGCC CGATTCGCGG CGTGGTCCAC GGCGCCGGCG TCCTCGCGGA CCGGCTCATC
GTCGACAAGA CCCCCGAGCA GTTCGGCCAG GTCTACAGCA CCAAGGTCGA AGGGCTGCGC
GCGCTACTGC ACGCAACGCG CAACGACGAA CTCCGCTTCA TCGCCCTCTT CTCCTCCTCC
ACCGGCCGCT TCGGCCGCGT GGGCCAGGTT GATTACGCGG TAGCCAACGA GGTCCTCAAC
AAGGTGGCCC AGGGCGAGGC GCGCCGTCGC GGCGACTGCC GCAGCGTCAG CATCAACTGG
GGTCCCTGGG ACGGCGGCAT GGTCACCCCG GCTTTGAAGA AAGTGTTCGC AGCCGAGGGG
ATCGGCGTCA TCGATCTCGC CGAAGGGGGA GAGTTCCTCG CGAAAGAGAT CTCCGCCGCC
GGCGCGCCGG TCGAGATCGT GGCCATAGCC CAACTCCCCG AGCAAAAGGG AGCGGCAGCC
CCGGCGCCCT CCGCGGCGAA GCAGGAGAAC CTCTCCGAGG CGTTCGCGCT GACCCTGACC
GTCCCGGAAT TCCCGTTCCT GCGCTCGCAC GTTTTGGACG GAAAAGCGGT GGTCCCCATG
GCCGTCATCG TGGAATGGCT CGCCCACGGC GCGCTCCACG GCAACCCCGG CTTCCGTTTC
CACGGCTTCA ACGACCTTCG CATCTGCAAA GGGGTGGTCT TCGAGGACAA CACCTCGTTC
CCCTTGAGCG TCTTGGCCGG GCGCGCCGTA AAGAAGGAAT CGTTCTGGCT GGTGCCGGTC
GAGCTTTCCA GCCCCGGGGT CAACGGCAGG ACCATCCTCC ACGCGAGAGC CGAGATCGTG
CTCGCCACGA AACACGTGGA AGGTATCCGC TCCATCACCG AGATACCGGC CACCGCCTAC
GCGCCGCACG ACGGGGTGAT CTACAACAAC GAGCGCCTCT TCCACGGCCC AGACCTGCAC
GGCATCGAGC ACGTCGACGG CTGCTCCGCG AAGGGTATCG CCGCCTCGGT CAAGGGCGCG
CCCGCGCCGG GCAAATGGAT CCGCCGCCCC TTGAGGAGCG CCTGGCTCAC AGACCCGCTG
GTCATGGACA GCGCCTTCCA GATGATGATC CTCTGGAGCT TCGAGCGCTT CGGCGCCGGA
TCGCTCCCCT GCTTCGCCGG GCGCTACCGC CAGTTCCAGG AATCCTTCCC GAAGGAAGGA
GCCCAGGTGG TCATCCGCGT CACCTCCGAG AACCCGCGCG GCGCCAGCGC CGACATGGAA
TTCCTGGACC GCAACACCGG CAAGCTCGTA GCGCGCCTTG AGGGATACGA GTGCGTCATC
GACCCGTCCC TCAAGCAGGC CTTCCAGCGT AACAAGCTGC GGACCGTTTC CGTTGCACTG
GGGGCGGCAT AG
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| Protein sequence | MKTDDLKPAA SSNGTQLAII GIGCLFPKAD DRDAYWANIA DGIDAITEVP ETHWPVDAYY
DANQKSPDRT YGRRGGFLSP VDFNPMEFNI PPNVLEAIDT SQLLGLVAAG QALKDAGYGP
ERSFDKSRAS VIIGVTGTLE LVIPLGARLG HPIWRSALKD AGVDEATAND VVERISDSYV
PWQENSFPGL LGNVVAGRIS KQYDLGGTNC VVDAACASSF SALHLASMEL ASGKSDIVVT
GGIDTFNDIF MYMCFSKTPA LSPSGNAKPF DVSADGTILG EGLGLVVIKR LADAERDGDR
IYAVVRGVGS SSDGKGDAIY APSAAGQKNA LLNAYKNADV TPQSIGLIEA HGTGTKVGDA
VEVSALRDVY GESELPWCCL GSVKSQIGHT KAAAGSAGLI KAALALHHKV IPPTIKVQTP
QKEVVGEKSP FYLAKEKRPW FPRADVPRRA AVSAFGFGGS NFHVVLEEYR ADKKAADWDG
NTQILAFSGA DAARLAAGLD RVPADAAWSA VRELAFQTRA SFDAKGALRL ALVIERGRTN
VASLVKNAKA MLEKNSKSAW QTPDGAFFGC GAAGKLGMLF PGQGSQYTGM LNDLACRFPQ
LLNAVTAANE GFTSAGGRRL SDLIYPPSAF DEETRSKQEE ALRATQAAQP AIGAVSLGAL
RLMQSFGLEP EAVAGHSYGE LTALCAAGRL DESALHALSR LRGELMGAGK GDKGSMLAVS
APLSKIAEVV AAEKLDLVIA NKNAPSQAVL SGACAQIKRA VELFKGRGLT CKELPVAAAF
HSTLVADAAT PFLAALAKIE MHKAKIQVFA NTTAAVYPAD AAAAKAQLAS QLAMPVEFVA
EIEAMYAAGI TSFVEVGPGN RLTGLVQAIL ADRPHSAVAL DASSGKRAGV ADLGRTLAQL
AVLGFGVKLA SWDEGYRPAP AGKKPLLSIP LCGANYQKPK PKKPPVQPKP AVVAAAAAPQ
AAPVAMNAPA AQPPAYQAAV AAPREAIFQA APSAAAAPQA ALSESLRLAR EGMAVLQRMQ
EDTAQLHRRF LEGQETATRT FQTLLQQQQQ LILGASISPA AVAPATVPVQ AQAQAYVAPA
PVVAPAAQVT APAAKAPVAP AAPAAPAVAA SPAPAAPAPA SVGADSARIT QVLLAVIAEK
TGYPVEMLEL DMGMDSDLGI DSIKRVEILS TLQERLPGTP AIGPEHLGTL RTLGDIAGHL
CASTAASAPA AVATAAPAAA TSGLAAEQIT STLLLVVAEK TGYPVEMLEF DMGMDSDLGI
DSIKRVEILS TLQERLPGSP AIGPEHLGTL RTLGDIAGFL SASAVSAPAA AAAPAVATGS
AIAAGEITST LLLVVAEKTG YPVEMLELDM GMDSDLGIDS IKRVEILSTL QERLPGTPAI
GPEHLGTLRT LGDIAGFLSA SAVSAPSAAS APAVVTGSAV AASEVTSTLL SVVAEKTGYP
VEMLELEMGM DSDLGIDSIK RVEILSTLQE RLPGTPAIGP EHLGTLRTLG DIATYLAAGS
ATAAPAGAGG ASPLAASAAA PAQPVAPPAA ASSDPARIMT TLLEVVADKT GYPVEMLEPG
MGMDSDLGID SIKRVEILST LQERLPDTPA IGPEHLGTLR TLGDIADFLV GASSAAAPAA
EGAAAAATAA AVEANQAVAA EPVPAPVQAI ERSSVTPVEL SADEEGEAIV LANDGEIWVT
DDGSAFASEL CGILLEHGCS VRKVNAAEAQ QTAPAGKLSG LVICAPMSGT DDIFLENAFQ
LVKNAAGALN ESARAEGAVC VTVSRLDGAF GFGSGKSIKD PLSGGLAGLA KTAALEWPEV
SCKAIDLGEF PHAAAAAGAV AIEMLRRGPV EVGLSSKGRF ALQTVVLPCA PAPAEPAIKA
GDVVVITGGG RGVTAISALA LAKEYKPFLV LLGRSSEPEE EAAWLAGVSG EAEIKRVIMQ
NAVGKLHPRE IEERYRAVVA GRELRDTLQK ISAVGAEAIY RSVDIRDRSA MELLLGEVRR
AHGPIRGVVH GAGVLADRLI VDKTPEQFGQ VYSTKVEGLR ALLHATRNDE LRFIALFSSS
TGRFGRVGQV DYAVANEVLN KVAQGEARRR GDCRSVSINW GPWDGGMVTP ALKKVFAAEG
IGVIDLAEGG EFLAKEISAA GAPVEIVAIA QLPEQKGAAA PAPSAAKQEN LSEAFALTLT
VPEFPFLRSH VLDGKAVVPM AVIVEWLAHG ALHGNPGFRF HGFNDLRICK GVVFEDNTSF
PLSVLAGRAV KKESFWLVPV ELSSPGVNGR TILHARAEIV LATKHVEGIR SITEIPATAY
APHDGVIYNN ERLFHGPDLH GIEHVDGCSA KGIAASVKGA PAPGKWIRRP LRSAWLTDPL
VMDSAFQMMI LWSFERFGAG SLPCFAGRYR QFQESFPKEG AQVVIRVTSE NPRGASADME
FLDRNTGKLV ARLEGYECVI DPSLKQAFQR NKLRTVSVAL GAA
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