| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2112 |
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| Symbol | |
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| ID | 8137448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2455485 |
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| End bp | 2457149 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644869727 |
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| Product | PfaD family protein |
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| Protein accession | YP_003021922 |
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| Protein GI | 253700733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCCAT TTTCACTACA GGGTGAACAT ACCGCTCGCT CTGCAAACCT GGAGAACCTG
GGATCGTGGC ACCCCGCCTC GAACGCCCCC CCTCAGAAGG CCGCCAACCT GAGAGACGCC
CTTCGCTACG TACGCCAGCC GCTGTATCTC GTGGAAAAGG AAGGGACCAT GGTCCCGAGG
CTGGGAGGCG TCGGCCGCCT CGGCGCCGTC AACCCGGGCG CGCTGCCGAT CGCAGCCTAT
GCCCCTGCCT GCTTTCCCGA AAACCTGGGG GATCCTTCTT TTTGCCGCGA ACTCGGCATC
CGCTACCCCT ACGTCGGCGG TTCCATGGCC AAGGGGATCA GCTCCGCGGC CATGGCCGAG
GAGCTGGGTC GCGCCGGGAT GCTCGGCTTC TTCGGCGCCG CCGGCCTTCC GCTCGCCACC
GTCTCGGAAA CCGCCGACCG CCTCAAGGCT TCCCTGGGCG ACATCCCCTA CGGCTTCAAC
CTGATCCACT CTCCGCACGA GCCCGAGCTG GAGAGCGAGC TCGCCGAGCT GTACATCAGG
AAAGGGATCC GCATCATCGA GGCCTCGGCG TTCCTGGCCC TGACGCTGCC GCTGGTCCGG
TACCGCCTGC ACGGCATCAA GCGCGCCGCC GACGGGACCA TCGTGACCCC CAACCGCATC
ATCGCCAAGG TCTCCCGCGA GGAACTGGCG ACTAAGTTCT TCGCACCGGC TCCCGAGAAG
CTCCTGCGCG CTCTGGTCGC CAACGGCTCC ATCACCGCCG AGCAGGCCGA ACTGGCCGCG
CTGGTCCCGC TGGCGCAGGA CGTGACGGCC GAGGCGGACT CCGGCGGCCA TACCGACAAC
CGACCCGCCC TCGCCCTCTT CCCGACCATC AACGCGCTGG CGGCGAAGCT CAAGCGCCAG
TACGGCTACA GCTGCCGCCT GCGGGTAGGG CTTGGCGGCG GCGTCTCGAC GCCGGCCTCC
GCCGCAGCCG CCTTCTCCAT GGGGGCCGCC TACCTCGTGA CCGGGTCGGT GAACCAGGCC
TGCGTGGAAT CCGGCACCTC CGACACCGTG CGCGGCATGC TCGCCGGCAC CCGCCAGGCC
GACGTGACCA TGGCACCCGC CGCCGACATG TTCGAGATGG GGGTCACCGT GCAGGTCTTG
AAGCGCGGCA CCATGTTCCC CATGCGCGCA CAAAAGCTCT ACGAGATCTA CCGCGCCTGC
AAAAGCCTCG ACGACATCCC CGCCGCCGAG CGCGAGAAGC TGGAGAAGAC CATGTTCCAG
GCGCCGCTCG CCGACATCTG GCGCGACACC CGCGCCTTCT TCTTAAAGCG CGACCCCTCC
CAGGTCGAGC GCGCCGAGCG CGACCCGAAG CACCTGATGG CGTTGGTCTT CCGCTGGTAC
CTCGGCATGG CCGCGCACTG GGCGAAAGAC GGCCTCGAGC CCCGGCGCAT GGACTACCAG
GTCTGGTGCG GCCCCGCCAT GGGAGCCTTC AACGAATGGG CCTCCGGCTC CTTCCTTGAT
ACCCCGGGCA ATCGCACGGT CGAAGCCGTG GCCCTCAACA TCCTGCACGG AGCGGCCGCA
CTTAACCGCG CCAACTTCCT GAGCAGCCAG GGCATCGAAC TCAGGATGGA TGAAATCGCA
CCGCAACCTC TCGAAATCGC ACAAATCAAG GAGTACCTTT GTTGA
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| Protein sequence | MDPFSLQGEH TARSANLENL GSWHPASNAP PQKAANLRDA LRYVRQPLYL VEKEGTMVPR
LGGVGRLGAV NPGALPIAAY APACFPENLG DPSFCRELGI RYPYVGGSMA KGISSAAMAE
ELGRAGMLGF FGAAGLPLAT VSETADRLKA SLGDIPYGFN LIHSPHEPEL ESELAELYIR
KGIRIIEASA FLALTLPLVR YRLHGIKRAA DGTIVTPNRI IAKVSREELA TKFFAPAPEK
LLRALVANGS ITAEQAELAA LVPLAQDVTA EADSGGHTDN RPALALFPTI NALAAKLKRQ
YGYSCRLRVG LGGGVSTPAS AAAAFSMGAA YLVTGSVNQA CVESGTSDTV RGMLAGTRQA
DVTMAPAADM FEMGVTVQVL KRGTMFPMRA QKLYEIYRAC KSLDDIPAAE REKLEKTMFQ
APLADIWRDT RAFFLKRDPS QVERAERDPK HLMALVFRWY LGMAAHWAKD GLEPRRMDYQ
VWCGPAMGAF NEWASGSFLD TPGNRTVEAV ALNILHGAAA LNRANFLSSQ GIELRMDEIA
PQPLEIAQIK EYLC
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