| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2104 |
|---|
| Symbol | |
|---|
| ID | 8137440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2448606 |
|---|
| End bp | 2449166 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644869719 |
|---|
| Product | DNA-3-methyladenine glycosylase |
|---|
| Protein accession | YP_003021914 |
|---|
| Protein GI | 253700725 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCCA TGAGGAAACT GCCCCGCTCC TTCTACGACC GCGACACTGT GACCGTGGCG
CGCGAGCTCC TAGGCGCAAG GCTCGTGCAC GTGGCGGACG GGGTGGAGCG GGTGGGGCGC
ATCGTGGAGG TGGAAGCGTA CCTTGGCGAG CGGGATCTGG CTGCCCATTC CTCCAAGGGG
CGTACTCCCC GCACCGCCAT CCTCTTCGGC CCTCCCGGTT TCGCCTACGT CTACCTGATC
TACGGCATTT ACTGCTGCAT GAACATCGTC ACCGAGCGTG AAGGAAACGC CTGCGCGGTG
CTTTTGCGCG CGCTGGAACC GGTGAGAAAC GTAGAGGGGC GAAGCTGCGG GCCAGGTCTG
CTCTGTCGCG CCATGGGGAT CGACCGCCGG CAAAACGGTC ACGACCTTTT AAGCGACGAT
TTCTTCGTGG CTGAGCGCTC CGAGCGGGAA ACGATGCAGG TAGTTTCCAG GCCGAGGATT
GGGGTCGATT ACTCAGGTAT CTGGGCAGGA AAGCTGCTGC GTTTCTACAT AGCCGGAAAT
TCCTTTGTCT CAAGACGATA A
|
|---|
| Protein sequence | MDSMRKLPRS FYDRDTVTVA RELLGARLVH VADGVERVGR IVEVEAYLGE RDLAAHSSKG
RTPRTAILFG PPGFAYVYLI YGIYCCMNIV TEREGNACAV LLRALEPVRN VEGRSCGPGL
LCRAMGIDRR QNGHDLLSDD FFVAERSERE TMQVVSRPRI GVDYSGIWAG KLLRFYIAGN
SFVSRR
|
|---|
| |