Gene GM21_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2086 
Symbol 
ID8137422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2419566 
End bp2421962 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content62% 
IMG OID644869701 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003021896 
Protein GI253700707 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.0947899999999999e-22 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAATC AGTCGGAAGT TGCGACCCCT GTCGACATCA GGACGAAAAG AGCTCCCGTT 
CCTATTACGG ATCCCCCCTC CGCCCCCCTC ATGCAGCGGG AGCCTTTCCG CGTCGATTAC
GAGCAGGTGC TACGGACCAT CTTGACAACG GCGCCCTTGG GCTTGTACCA GACCGACATC
GACGGCCGGA GAATCGCCTC GGCAAACGAC GCTGCCGGGG ATGACGAGAA CGAAGCGCTG
ATCGGCTTCA TCCACCCACA GGAGCGCAAG GCGCTCACGG CCGGCTGGCA GCAGAGCATG
GAGAGTGGAG CCCAGTGGTC CCAACGCTTC AAGTACCGTT CAGCCGACGG CAGGGTGTTC
TGGCTGCAGG CCGTGATTGC CCAGGTGCGA AACAGCCGGG GCGAGGTGAC CGGCTACCAG
GGTTGCAACC TCGACATCTC AGCCGAACTC CTCGCCAACG AGCAACTGGC GCTCAGCGAG
GAACGCCACC GTAAGGCGGT GGCGGGGGTG AATTCCGGGA TCTGGGATCT GGACGTCGCC
ACCAGCACCT GCTACTTCAG CCCTTTTTGC TACGAAATGC TCGGCTACCG CCCGGGACAG
TCGCCGGTAC GACTTGAGGA CTGGAGCAGC ATCATGCACC CGGGACAGTT GGAAGCCGCG
CGCGCGCTCA AGGACAGATG CGTCGAGGGG GCCGTGGAGA ACTTCGAGTT CGAATTCCGC
CTGAAGACCA ACGAGGGGAA ATGGCGGTGG TTTCGCTGCA AGGGGAAAGC GGCCGACCGC
GACGCCTCCG GGAAGGCAAT CCGGCTGGCG GGGATATTGT GCGACATCAA CCAGGGGAAG
ATGATGGAAC ACCTGTTGCG CATGGAACAC GACCTGCTGA ACCTGATCAC CTCCACAAGC
CCCGTCGGTA TCATGTTCAT CGAGCCCGAC GGCAAGGTGG CCTTTGCCAA TCCCCGCGCC
GAACTTATCC TCGGGCAGAC CAAGCATGAG ATGGCTGGCA GAAACGACGG CTCCCCGGTC
TGGGGCATCG CCCGCGAACA AAGCCAAGGC CGCTTCGAGC CGGATCTGTC GCTTGGGGAA
CTGCTGCGCA CGGGTGAATC CCTGTCGAAC GCCTGCTTCC GGTTCCTGCG CCCGGACGGC
GTAGCCGCGC TCCTCTCCAT CAGCACCGCC CCTTTCCTGG ACCAGGCAAG CAAGGTGAGC
GGGACCGTGG TGACGCTCGA GGACGTTTCG GAACAAAAGC AGCGCGAGCA GGTCATGGCC
GACAACGACC GGTTGCTGCG CGAAACACAG AGAATCGCCC AACTGGGGAG TTACGTCCTC
GACCTGGCCG GTGACTGCTG GAACTGCTCC AGCAAACTGG AGGAGATCCT GGGGATGGAT
CAAACCTTTC CCAGGACCCT GCAAGGGCAC ATCGAGATTG TCCACGACGA GTACCGGGAG
CTTTTCAAGG AAAGGTACCT GGCAGCCATC GGCGACGGGC GCCCCTTCGA GATGGAATAC
CCGATACGCA GGCAAAGCGA CGGCGTGGAG CGCTGGGTGA CAGAGTGCTG CGAGCTTTCC
GAGGTGGCCG CGGGGAAGCG GCAGCGGATG ATCGGCACCA TCAAGGACAT CACCGAGAGG
AAGGAGGCCG AAGAGGCGAT CAGGAAACTG AACGACGAAT TGGACCGGCG GGTGATCGAA
AGAACCTCAC AACTGGCGGC GGCGAAGCAG GAAATCGAGT CCTTCAGCTA TTCCGTTTCC
CATGACCTCC GTGCGCCGCT GCGACATATC AACAGCTACA GCTCCATCCT GATGGAGGAG
CACGGCCACG CAATGCCTGA GGAAGCGCGC TACTACCTGG AGCGGATCAG CACGGCCAGT
TCCAGGATGG GGAAGCAGAT AGACGACCTC TTAACCCTCA CCAGGGTCGG CAGGACTTTG
ATGAAGCGCC GAACCTTCGA CATCAGCCTT CTTGCGGCGG AGGTGACCGA CATGCTGGCC
GGGGAGGAGG GCTCGCAGCC CGTCGAGTTC CAGGTACAGC AAGGGCTGAC AGCTTTCGGC
GACAGCATGC TGGTGCGCCT TGTTTTGCAG AACCTGCTGG GCAATTCGAT GAAGTACGCC
TCCAGGGTCC CCCTCCCGGT GATCGAGTTC GGCCAGATTC AGGGGCGCGG GCGCCAGACC
TTCTTCGTAA AGGATAACGG GGTCGGCTTC GACATGGCCT ACGTCGATAA GCTCTTCCAG
CCGTTCCAGC GCCTGCACGG GTCGGAGTTC GAGGGAACCG GCATCGGCCT TGCCACCGTG
CGCCGCATCA TCGACCGCCA CGGGGGGAGC ATCTGGGCCG AGGGGAAGGA GAACCACGGC
GCCACCTTCT ACTTCACCCT TTCCCAACCG CGCAAAAACG CCGCTCAGCA CGAGTAA
 
Protein sequence
MNNQSEVATP VDIRTKRAPV PITDPPSAPL MQREPFRVDY EQVLRTILTT APLGLYQTDI 
DGRRIASAND AAGDDENEAL IGFIHPQERK ALTAGWQQSM ESGAQWSQRF KYRSADGRVF
WLQAVIAQVR NSRGEVTGYQ GCNLDISAEL LANEQLALSE ERHRKAVAGV NSGIWDLDVA
TSTCYFSPFC YEMLGYRPGQ SPVRLEDWSS IMHPGQLEAA RALKDRCVEG AVENFEFEFR
LKTNEGKWRW FRCKGKAADR DASGKAIRLA GILCDINQGK MMEHLLRMEH DLLNLITSTS
PVGIMFIEPD GKVAFANPRA ELILGQTKHE MAGRNDGSPV WGIAREQSQG RFEPDLSLGE
LLRTGESLSN ACFRFLRPDG VAALLSISTA PFLDQASKVS GTVVTLEDVS EQKQREQVMA
DNDRLLRETQ RIAQLGSYVL DLAGDCWNCS SKLEEILGMD QTFPRTLQGH IEIVHDEYRE
LFKERYLAAI GDGRPFEMEY PIRRQSDGVE RWVTECCELS EVAAGKRQRM IGTIKDITER
KEAEEAIRKL NDELDRRVIE RTSQLAAAKQ EIESFSYSVS HDLRAPLRHI NSYSSILMEE
HGHAMPEEAR YYLERISTAS SRMGKQIDDL LTLTRVGRTL MKRRTFDISL LAAEVTDMLA
GEEGSQPVEF QVQQGLTAFG DSMLVRLVLQ NLLGNSMKYA SRVPLPVIEF GQIQGRGRQT
FFVKDNGVGF DMAYVDKLFQ PFQRLHGSEF EGTGIGLATV RRIIDRHGGS IWAEGKENHG
ATFYFTLSQP RKNAAQHE