Gene GM21_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2056 
Symbol 
ID8137392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2382150 
End bp2383421 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content62% 
IMG OID644869671 
Productouter membrane efflux protein 
Protein accessionYP_003021866 
Protein GI253700677 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.000000000000544389 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACACC GGCTTTTATC GTTCTACCTA TTGCTGGCTC TCTTTCTTCC TGTCCCGAAG 
ACCCACGCCG AGCCCGCCCC GCCCGTAGAA AACCTCCCGA CTCTCGTCGA AACCGCGCTC
GCCCAAAACC CCGAACTGAA GTCGTCCGCC GCACGCTGGC AGATGTACCG GAGTCGGGCG
GCCCAGGCGG GCGCGCTGGA AGATCCGATG CTCATGTTCA AGATCCAGAA CGGCATCGTG
ACCGACCCGC TTAGTTTCAC TGCGGACGGC ATGACCCAAA AGGTGATCGG CATCAGCCAG
CAGCTCCCCT TCGCCGGCAA GAGGAAGCTC AAGGAGGAAA TCGCGTCCAA GGAGGCCGAA
ACCTACCGCT GGAGCATCGA GGAGCGCAAA CTCGAGCTGA CCCGGATGGT CAAGGAGGCC
TACTACCAGA TCTACTTCAC CGACAAGTCG CAAGGCATCC TCGATAAAAA CATCAGGATC
CTCGACGATT TCATCGCGCT GGCCCAGACC AAGTACTCGG TGGGGCAGGG GGCGCAGCAG
GACATCTACA AGGCGCTCCT GGAGCGCTCC CGCATGCTGG ACATGAAGAT CACCCTGGAA
CAGCAGAGAA GGAGCCTGGA GGCGAACCTC AACTCGCTTT TGAACCGCCC GCAGTCCACG
CCGGTCGGGC GGGTCGCCGA CTTCAAGCTG GCCCCGCTCA GCCAGACCCC CGAGCAACTT
TGGGAGACTG CCGAAGCTAA CCGCCCGCAG TTGAAAGCGC TCAGGGCTCA GATCGAACGG
GGAAGGGCGG GGCACGAACT GGCCCGGAAG GAATCCTATC CCGACTTCAA CGTCTCCTTC
GAATACATGC AGCGGCAAAA GGCGATGGGG AGCGACGGCT CCGACATGTA CTCGCTGGGG
GTGACCTTCA ACCTCCCGAT CCAGAAGGAG CGGCGCCAGG CGATGGTCGC CGAGTCCTCC
TCCGAGGTGA CCATGGCCGG GGAGGAACTG GCGGGGGTGA AGAACACCAT CACCGCCGGC
ATCGCCGACC TCTTGGCGCA GCTTGACCGC CGCAAGAAGC TCGTCGAGCT CTACAGCTCC
GGGATCATCC CTCAGGCCTC CGAATCGCTG GAATCCGCCG TGATCGGCTA CCGCGTGAAC
AAGGTGGACT TCCTGACCCT GCTCGACAAC CGGGTCACCC TGTTCAACTA CGAGCGGGAG
TACTACGACT CGATGGCGGA CTACCAGATG AAGCTGGCGC AGCTTGAGGC GCTGATCGGC
AAGGAACTCT AA
 
Protein sequence
MKHRLLSFYL LLALFLPVPK THAEPAPPVE NLPTLVETAL AQNPELKSSA ARWQMYRSRA 
AQAGALEDPM LMFKIQNGIV TDPLSFTADG MTQKVIGISQ QLPFAGKRKL KEEIASKEAE
TYRWSIEERK LELTRMVKEA YYQIYFTDKS QGILDKNIRI LDDFIALAQT KYSVGQGAQQ
DIYKALLERS RMLDMKITLE QQRRSLEANL NSLLNRPQST PVGRVADFKL APLSQTPEQL
WETAEANRPQ LKALRAQIER GRAGHELARK ESYPDFNVSF EYMQRQKAMG SDGSDMYSLG
VTFNLPIQKE RRQAMVAESS SEVTMAGEEL AGVKNTITAG IADLLAQLDR RKKLVELYSS
GIIPQASESL ESAVIGYRVN KVDFLTLLDN RVTLFNYERE YYDSMADYQM KLAQLEALIG
KEL