Gene GM21_2055 details

Gene Information

• Locus tag: GM21_2055
• ID: 8137391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 2381186
• End bp: 2381854
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644869670
• Product: ABC transporter related
• Protein accession: YP_003021865
• Protein GI: 253700676
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.00000000000000459409
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCACTCA TTGAAATCAA GGATGTAAAG AAGCAGTATC AGACCGGCTC GGACACGGTC 
GAGGCCCTTC GCGGCGTGAA TATCAGCATC GAGGCGGGTG AGTTCATCAC CATCATGGGG 
CAATCCGGCT CAGGAAAGAG CACCCTTCTG TCGGTCCTTG GGGGGATGAA CCATCCCACC 
AGCGGCGAGG TGGAGATGGC GGGGGTGAAG CTCTACCAGC TTCCCAGCGA GAAACTGGCC 
GATTTCCGGG CGCAGAACCT GGGATTCGTC TTCCAGTCCT TCCATCTGAT CCAGTATCTG 
ACCGCGCTGG AGAACGTGAT GCTGCCGCTG GCCATCGTCA AGATGTCAAC CGCCGCCAAA 
AAGGACGCCG CCCGCTCTGC ACTTGAGCGG GTAGGGCTTG GCGGCAAAGC GGACCGGCTC 
CCGAACCAAC TCTCCGGCGG CGAGCAGGAA AGGGTCGCCA TCGCCCGCGC CATAGTGAAC 
AACCCGCACA TCCTTTTGGC GGACGAGCCC ACAGGAAACC TCGACTCCAA AACCAGCGAG 
GAAGTCATGG CGTTGTTCCG GCAACTGAAT GAGGCGGGCC AGACCGTGGT CATGGTTACT 
CACAACCCGG AGAACGGCAC TTACTCCGAT AGGACCATAA GCTTGAGGGA CGGTCTGGTC 
AGCGCATAG 

 

Protein sequence

MALIEIKDVK KQYQTGSDTV EALRGVNISI EAGEFITIMG QSGSGKSTLL SVLGGMNHPT 
SGEVEMAGVK LYQLPSEKLA DFRAQNLGFV FQSFHLIQYL TALENVMLPL AIVKMSTAAK 
KDAARSALER VGLGGKADRL PNQLSGGEQE RVAIARAIVN NPHILLADEP TGNLDSKTSE 
EVMALFRQLN EAGQTVVMVT HNPENGTYSD RTISLRDGLV SA