Gene GM21_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2042 
Symbol 
ID8137378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2366162 
End bp2366905 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID644869657 
ProductABC transporter related 
Protein accessionYP_003021852 
Protein GI253700663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00000000000000858552 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTAAGA TCAAGAACAT AAACGCCTAC TACGGGAAGG TCCACGCGCT GAAGAACGTG 
TCGCTGCACC TGAACCGCGG CGAGATCGTC ACCCTTATCG GCGCGAACGG CGCCGGCAAG
ACCACGCTCC TCAACACCTT GTCCGCCATC ATCCCTACCG CCAGCGGCGA AATGATGCTG
GAAGGGAAGA ACATCGCGGG GCTCGCCGCC GACCGGGTGG TGTCGCTTGG GCTCTCGCAG
GTACCCGAGG GGCGGCAGGT CTTCAACCCG CTCACCGTCG AGGAGAACCT GGAGCTGGGC
GCGTACCTGC GCTACCGCAT GGGGGGGCAG AGGCAGGAGA TAGCCGAGGA CCTGGAGCGG
ATGTTCCAGA TGTTCCCGCG TCTCAAGGAG CGCAGGCGGC AGGCCGCCGG CACCCTTTCC
GGCGGAGAGC AGCAGATGCT CGCCATAGGC CGGGCGCTCA TGGCGCGCCC GAAGCTGCTC
CTATTGGACG AGCCTTCCAT GGGACTCGCG CCGCTCGTGG TGCAGGACAT CTTCAGGGTG
ATTAAGAACT TGAGGGAAGA AGAGGGGGCC AGCATCCTGC TGGTGGAGCA GAACGCCCGC
GCCGCCCTCA AAGTCGCCGA CCGCGGCTAC GTGTTAGAGA CCGGCAAGGT GATCCTCGAA
GGCAAAGCCG CCGAGCTTTT GGAAAACAAG GACGTGCAGC GCGCCTATCT GGGGCGCGAC
AAGAAGGAAA TCTGGGAACA ATGA
 
Protein sequence
MLKIKNINAY YGKVHALKNV SLHLNRGEIV TLIGANGAGK TTLLNTLSAI IPTASGEMML 
EGKNIAGLAA DRVVSLGLSQ VPEGRQVFNP LTVEENLELG AYLRYRMGGQ RQEIAEDLER
MFQMFPRLKE RRRQAAGTLS GGEQQMLAIG RALMARPKLL LLDEPSMGLA PLVVQDIFRV
IKNLREEEGA SILLVEQNAR AALKVADRGY VLETGKVILE GKAAELLENK DVQRAYLGRD
KKEIWEQ