Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2025 |
Symbol | |
ID | 8137361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2349208 |
End bp | 2349933 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644869640 |
Product | ABC transporter related |
Protein accession | YP_003021835 |
Protein GI | 253700646 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000000000164483 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGAAG TGGTTCGCCT CATCGACGTC GCCAAGGTGT ACACCATGGG CGAGGAACGG GTCGAGGCCA TGAAGGGGGT CTCCTTCGCC GTCAACCGCG GCGAGTTCGT CTCCATCATG GGGGCCTCGG GGAGCGGCAA GTCGACCTGC ATGAACATCC TGGGGTGCCT GGACGTCCCC ACCCGCGGGG AGTACCTCCT GGACGGCATG GACGTGGGGA GGCTATCCCC CGACCAGTTG GCCGAGGTGC GCAACAAGAA GCTCGGCTTC GTGTTCCAGG GATTCAACCT TTTGGCCCGG ACCACGGCGC GCGAGAATGT CGAGCTGCCG CTGGTCTATT CCCACGTCCC CGCGGCGGAG CGCCGTGCCC GCGCCCACGA GGCGCTTCAG CGGGTGGGGC TTGCCGGGCG CGAGGGGCAC TACTCGAACC AGCTCTCCGG CGGCCAGCAG CAGCGCGTCG CCATAGCGAG AGCCCTGGTC AACAGCCCCT CCATCATCCT CGCCGACGAG CCAACCGGAA ACCTGGACTC CAGGACCACG GTGGAGATCA TGTCCATCTT TCAGGAGCTG AACCGGCAGG GGATCACCAT CATCATGGTT ACCCACGAAC CGGACGTGGC CGAATTCACC GGGAGGCACA TCATCTTTCG CGACGGCCTG ATCGTTTCCG ATACCCCATA TGCCGCGAAG AGCGCGCCCG TCCCGGGGGA GGTGGCCAGG TCATGA
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Protein sequence | MNEVVRLIDV AKVYTMGEER VEAMKGVSFA VNRGEFVSIM GASGSGKSTC MNILGCLDVP TRGEYLLDGM DVGRLSPDQL AEVRNKKLGF VFQGFNLLAR TTARENVELP LVYSHVPAAE RRARAHEALQ RVGLAGREGH YSNQLSGGQQ QRVAIARALV NSPSIILADE PTGNLDSRTT VEIMSIFQEL NRQGITIIMV THEPDVAEFT GRHIIFRDGL IVSDTPYAAK SAPVPGEVAR S
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