Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2024 |
Symbol | |
ID | 8137360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2347948 |
End bp | 2349207 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644869639 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003021834 |
Protein GI | 253700645 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000000000305818 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAAAAA TCATAGGCGC CGTTTTACTG CTGCTGGTCC TGGGTGTGGC CGGCTACTTC TACTTCAAAC AGCCGCCGAA ACCGCAGTAC AAGACGCAGA AGGCGGAGCG GGGATCCATC ACCTCGACCG TTTCGGCGAC TGGAACGCTG AACGCCGTGG TGACCGTGCA GGTGGGAACG CAGGTTTCCG GCACCATCGC GAAGCTTTAC GTCGACTTCA ACTCCCAGGT CAAGAAGGGT CAGCCCATCG CTCAGATCGA CCCGGCCCTT TTTCTCTCCG CGGTGCAGCA GTCTCGCGGC AACGCCCTGA ACGCCGAGGC GAGCCTCGCC AAGGCGAGGG TGACCCTGGC CGACGCGAAG AGGACCTATA ACCGCAACAA GGCGCTTTTA GCCGAGGGTA TCATCGCGCA AAGCGACCTC GACGCCGCCC AGACCGCCTA CGACTCGGCG GTTGCCGGGG TGCGCGGAGC CGAGGCGGTG CTTTTGCAGA CCCGGGGCGC CCTCAGGCAG GCGGAGACGA ACCTCAACTA TTCCACCATC AAGTCGCCGG TCGACGGCAT CGTCGTCTCC CGCAACGTGG ACGTGGGGCA GACTGTAGCT GCCTCCTTCC AGACGCCGAC CCTCTTCACC ATCGCGCAGG ACCTGACCAA GATGCAGATC GACACCAGCA TCGACGAGTC GGACATAAGC CGCCTCAAGG TGGGTCAGAA GGCCGAGTTC ACCGTGGACG CCTATCCCGA GCAGACCTTC GAGGGGGCCG TGGTGCAGAT CCGAAACGCC CCGGTGGTGA CGCAGAACGT GGTCACCTAC GTGGCCGTGA TCGGCGTCGA CAACCGGCAG CTCCTATTGA AGCCCGGGAT GACGGCCAAC GTGGCCGTGC AGACCATGAG AAAGGACGAC CTGCTCAAGG TCCCCACCGC CGCGCTCAGG TTCAAGCCCA AGGCGGAGAA GGGGAAAGAG AAGGATAAAG GGAAGGGTGG CAAGGGCGCC GGCATGACAC AGGCCGCCCC CAAGGGGAGC GTCAGGATGC AGGGAGAGGG AAGAAGCGCC GCCGCCAACG GGGCGAAGCA GACCGTCTAC CTGTTGAAGG GGGAAGGAAC AGCCGTTCCC GTGGCCATCA CCACCGGCAT CAGCGACGGG GCCTCTGTCG AGGTGGTGAG CGGCGCCTTG AAGGAAGGGG ACGACGTCAT CATCGAACAG GTGAGCCAGG ATAAGAAGAA AAGTGGCATG GGCCGCTCGC CGATGGGACC GAGGTTCTAG
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Protein sequence | MKKIIGAVLL LLVLGVAGYF YFKQPPKPQY KTQKAERGSI TSTVSATGTL NAVVTVQVGT QVSGTIAKLY VDFNSQVKKG QPIAQIDPAL FLSAVQQSRG NALNAEASLA KARVTLADAK RTYNRNKALL AEGIIAQSDL DAAQTAYDSA VAGVRGAEAV LLQTRGALRQ AETNLNYSTI KSPVDGIVVS RNVDVGQTVA ASFQTPTLFT IAQDLTKMQI DTSIDESDIS RLKVGQKAEF TVDAYPEQTF EGAVVQIRNA PVVTQNVVTY VAVIGVDNRQ LLLKPGMTAN VAVQTMRKDD LLKVPTAALR FKPKAEKGKE KDKGKGGKGA GMTQAAPKGS VRMQGEGRSA AANGAKQTVY LLKGEGTAVP VAITTGISDG ASVEVVSGAL KEGDDVIIEQ VSQDKKKSGM GRSPMGPRF
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