Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2017 |
Symbol | |
ID | 8137351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2339720 |
End bp | 2340424 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644869630 |
Product | ABC transporter related |
Protein accession | YP_003021827 |
Protein GI | 253700638 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00000000000531605 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGAGC CTATCATCCA ACTGAGCGGG GTGTGCAAAT CTTTCCAGGA GGGGGAGAGG GAGCGGGTGG TTTTCCGCGA CGCCTCTCTT GTCGTGGAAC CGGGCGAGTG GCTCTTTCTT TTAGGGCGCA GCGGCTCGGG TAAATCAACC CTGCTCAACC TGGTGAGCGG CATCGACCTT CCCGACTCGG GCGAAGTGAG GGTGGCGGGT CAGCCCCTGA ACCGCCAGAG CGAACGCGAG CGGACCCTGT TCCGGCGCAG CAGCATCGGC TTCGTCTTCC AGTTCTACAA TCTCATCCCC ACCTTGACCG TCCTCGAAAA CGTCCTGCTT CCCCTGGAGC TGGCCGGCCT CCTCAACCAA GAACAAGACG ATCTGGCGCG CGACCTGCTG CAGCAGGTGG GGCTCGCGGA CCGGGCGGCG AGCTTTCCGG ACCGGTTATC AGGCGGCGAG CAGCAGCGCG TAGCCGTGGC CCGCGCCCTG GTGCACCGGC CCAAGTTGGT GCTGGCCGAC GAGCCCACCG GCAACCTGGA CGCCGAGACG GGCCGGCAGG TGCTCGACCT TTTCCAGCGC CTGTTAAGGG AGAGCGGGAC GACGCTCTTG CTGGTGACCC ATAGCGGCGA GGTCGCGGCC CTGGCCGACC GGGTGCTCAC CATTGAGAAC GGCCTCTTGG TCGAGGCGGG GCGCCGCGCA GGGGGCGAGC CATGA
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Protein sequence | MAEPIIQLSG VCKSFQEGER ERVVFRDASL VVEPGEWLFL LGRSGSGKST LLNLVSGIDL PDSGEVRVAG QPLNRQSERE RTLFRRSSIG FVFQFYNLIP TLTVLENVLL PLELAGLLNQ EQDDLARDLL QQVGLADRAA SFPDRLSGGE QQRVAVARAL VHRPKLVLAD EPTGNLDAET GRQVLDLFQR LLRESGTTLL LVTHSGEVAA LADRVLTIEN GLLVEAGRRA GGEP
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