Gene GM21_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2017 
Symbol 
ID8137351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2339720 
End bp2340424 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID644869630 
ProductABC transporter related 
Protein accessionYP_003021827 
Protein GI253700638 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00000000000531605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGAGC CTATCATCCA ACTGAGCGGG GTGTGCAAAT CTTTCCAGGA GGGGGAGAGG 
GAGCGGGTGG TTTTCCGCGA CGCCTCTCTT GTCGTGGAAC CGGGCGAGTG GCTCTTTCTT
TTAGGGCGCA GCGGCTCGGG TAAATCAACC CTGCTCAACC TGGTGAGCGG CATCGACCTT
CCCGACTCGG GCGAAGTGAG GGTGGCGGGT CAGCCCCTGA ACCGCCAGAG CGAACGCGAG
CGGACCCTGT TCCGGCGCAG CAGCATCGGC TTCGTCTTCC AGTTCTACAA TCTCATCCCC
ACCTTGACCG TCCTCGAAAA CGTCCTGCTT CCCCTGGAGC TGGCCGGCCT CCTCAACCAA
GAACAAGACG ATCTGGCGCG CGACCTGCTG CAGCAGGTGG GGCTCGCGGA CCGGGCGGCG
AGCTTTCCGG ACCGGTTATC AGGCGGCGAG CAGCAGCGCG TAGCCGTGGC CCGCGCCCTG
GTGCACCGGC CCAAGTTGGT GCTGGCCGAC GAGCCCACCG GCAACCTGGA CGCCGAGACG
GGCCGGCAGG TGCTCGACCT TTTCCAGCGC CTGTTAAGGG AGAGCGGGAC GACGCTCTTG
CTGGTGACCC ATAGCGGCGA GGTCGCGGCC CTGGCCGACC GGGTGCTCAC CATTGAGAAC
GGCCTCTTGG TCGAGGCGGG GCGCCGCGCA GGGGGCGAGC CATGA
 
Protein sequence
MAEPIIQLSG VCKSFQEGER ERVVFRDASL VVEPGEWLFL LGRSGSGKST LLNLVSGIDL 
PDSGEVRVAG QPLNRQSERE RTLFRRSSIG FVFQFYNLIP TLTVLENVLL PLELAGLLNQ
EQDDLARDLL QQVGLADRAA SFPDRLSGGE QQRVAVARAL VHRPKLVLAD EPTGNLDAET
GRQVLDLFQR LLRESGTTLL LVTHSGEVAA LADRVLTIEN GLLVEAGRRA GGEP