Gene GM21_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2012 
Symbol 
ID8137346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2334936 
End bp2336177 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content65% 
IMG OID644869625 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003021822 
Protein GI253700633 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000000000000197881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCAG AACAGATCTC TCTTTCCTAC CGAAGATACG CGCTGGGACT GCTCCTGGCG 
GTCAACCTGC TCAACTACAT CGACCGGCAG GTTCTCTTCG CGGTATTCCC CCTGATCAAG
GCCGACCTCA ATATAAGCGA CACCGAACTG GGGCTTCTCG GCAGCGCTTT CATGCTGAGC
TACATGGTCA TCGCTCCGGT CTTCGGCTGG CTTGGGGATC ACTGGGACCG GGTCAAGCTC
GCCTCGTCCG GCGTCGTGGT CTGGAGCCTG GCGACCGTCC TCGCCGGTTT CGCGCCCGGC
TACCGGACGC TCCTTGCGGC GCGGGCCACC GTCGGGGTAG GGGAGGCGAG CTTCGGGACC
GTCTCCCCAG GGCTCATCGC CGACTTCTTC CCGAAGGATC AGCGCGGCCG CATCCTTTCC
TGGTTCTACG TGGCGATTCC CGTGGGGAGC GCCATGGGTT ACCTCCTGGG GGGTGTCTTG
GGGCACCGTT TCGGGTGGCA CGCCGCCTTC CTCATGGTGG GCCTGCCGGG AATCCTCCTC
GCGCTGCCGC TTTGGTTTTT GCGCCCCCCG GTGCGCGGGG GTAAAAGGGC CACCGAGCAG
GTCGCCGGGG AGAAGGGGAT GGCTGCCTAC CTGCAGCTCT TCAGAAACCG CGCCTTCGTC
ACCAACACCC TCGCCATGGC GGCCATGACC TTCGCCATAG GAGGACTGGC GCAGTGGATC
CCGACCTTCC TGTTCAGGGC CCACGCCCTC GACGTCGAGA AGGCCAACAC CCTCTTCGGG
GCCACCACGG TGCTGGCGGG GATAATGGGG ACCCTGGCCG GTGGGTGGCT CGGTGACCGC
TGGCAGAAAA AGAGCAGCAA GGGATACCTG CTCGTTTCGG GATGGGGGTT CTTCATCGGC
GCCCCCTTCG CCGCCTGGGC CATCATGGCG CCGGCGCTAC CGGTCTGCAT GGCCGCCATC
TTCGTGGCCG AGTTCTTCCT CTTCCTTAAC ACCGGCCCGC TCAACACGGT GATCATCAAC
GTGACGCGCC CCGCCGTGCG CGCCATGGCC TTCGCGGTGA ACATCTTCTT CATCCACGCC
CTGGGCGACG CCGTCTCGCC CTCTATGCTG GGGTGGCTTT CCGATCAGTG GGGGCTGAGG
CTCGCGCTTC TCTCCACCCC GCTGGTGATG GCGCTGGCAG GTGTGTTCTG CTTTGTCTGC
GGCAGGTACG TGGCGCACGA CATGGCGCAG GCCGAGCCCT GA
 
Protein sequence
MQAEQISLSY RRYALGLLLA VNLLNYIDRQ VLFAVFPLIK ADLNISDTEL GLLGSAFMLS 
YMVIAPVFGW LGDHWDRVKL ASSGVVVWSL ATVLAGFAPG YRTLLAARAT VGVGEASFGT
VSPGLIADFF PKDQRGRILS WFYVAIPVGS AMGYLLGGVL GHRFGWHAAF LMVGLPGILL
ALPLWFLRPP VRGGKRATEQ VAGEKGMAAY LQLFRNRAFV TNTLAMAAMT FAIGGLAQWI
PTFLFRAHAL DVEKANTLFG ATTVLAGIMG TLAGGWLGDR WQKKSSKGYL LVSGWGFFIG
APFAAWAIMA PALPVCMAAI FVAEFFLFLN TGPLNTVIIN VTRPAVRAMA FAVNIFFIHA
LGDAVSPSML GWLSDQWGLR LALLSTPLVM ALAGVFCFVC GRYVAHDMAQ AEP