| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2002 |
|---|
| Symbol | |
|---|
| ID | 8137336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2322626 |
|---|
| End bp | 2323693 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644869615 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_003021812 |
|---|
| Protein GI | 253700623 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 1.3837300000000002e-24 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACATGG CGGACGCTTT GCTTTCCCCG GCGGTGGGAG GGACCATGTG GGCGGTCTCG
GCAGGGACAA TCGCCCTTAG TTCCGCCCGC CTGCGCCGGG AGCAGGACGA CCGCCAGGCG
CCTCTGATGG GTGTGCTGGG AGCCTTCCTT TTCGCCGCGC AGATGATCAA CTTCTCCATA
CCCGGCACCG GTTCCAGCGG ACACTTAAGC GGCGGTTTGC TGCTGGCGGT ACTGCTCGGC
CCTTCGGCCT CCTTCCTGAC CCTCGCCTCG GTGCTGGTAG TGCAGGCTCT GTTCTTTGCC
GACGGAGGGC TCCTCGCTCT TGGCTGCAAC ATCTTCAACC TGGGCGTCAT CCCATCCTTT
CTGGTCTACC CGTTCTTGTA CCGCATCCTC TCGAAGGGGG ACAGGCACCT TGCGGAGCCG
GTCCCCGGCG GCACGCCTGG TAATTTGCGG GAAACCGCGG CCGTCATGGT AGCCACGCTG
GTGGCCATGC AGCTAGGCTC CCTGGCCGTC GTGCTGGAAA CCGGTTTTTC GGGTATCTCT
TCGCTTCCTC TGGAGCGTTT CCTGTTGTTG ATGCAGCCCA TACATCTCGC CATCGGAGCG
GTCGAGGGGG CGGTGACAGT CGCCATCCTT TCCTTCGTGC GCAAGGCGCG CCCGGAACTG
TTGCAGCGTG ATCAGGCTGG TAATGTCGGA CGCTCCCGCT TCGCGGTTTT GCTCGCCTTC
CTGGTCCTCA CCCTGGTCAC CGGCGGCCTC CTTTCCCCGT TGGCTTCCAA AAACCCCGAC
GGGCTGGAAT GGTCGCTCTC CAAAGTGGGT GGCGACGCGG TCGTTCCCGG TGCGGGAGAG
GGGATGCACG GTCTTCTCGC TCACCTGCAG GAAAAAAGCG CATGGTTCCC CGATTACGTC
GTGAAGCGTG CCGCGCCCCG TCCGCTGCCA AACGGTGCCG TCGATCTGCC TGCTGCCGCG
AGCGCCGTTC CGGGAGTAGT CGGCACCCTC CTCACCCTTG CCCTTATCTG CGTCGCCGGG
GCGCTGTTGA AGAGAGGAAA GCAAAGGGCG GATATACCCG ATGCCTGA
|
|---|
| Protein sequence | MHMADALLSP AVGGTMWAVS AGTIALSSAR LRREQDDRQA PLMGVLGAFL FAAQMINFSI
PGTGSSGHLS GGLLLAVLLG PSASFLTLAS VLVVQALFFA DGGLLALGCN IFNLGVIPSF
LVYPFLYRIL SKGDRHLAEP VPGGTPGNLR ETAAVMVATL VAMQLGSLAV VLETGFSGIS
SLPLERFLLL MQPIHLAIGA VEGAVTVAIL SFVRKARPEL LQRDQAGNVG RSRFAVLLAF
LVLTLVTGGL LSPLASKNPD GLEWSLSKVG GDAVVPGAGE GMHGLLAHLQ EKSAWFPDYV
VKRAAPRPLP NGAVDLPAAA SAVPGVVGTL LTLALICVAG ALLKRGKQRA DIPDA
|
|---|
| |