| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1979 |
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| Symbol | |
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| ID | 8137313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2293073 |
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| End bp | 2294083 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644869592 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003021789 |
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| Protein GI | 253700600 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 105 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCCG CTTTCCAGGT GACTCAGGGG GAAGGATCTG ACATACTTGC CGCCATGAAA
AACGAGCAGG AAGAAAACCT GGAGAGTGCG GAGGAGTGGG TGGCGGTGCC GCCGGCCAAG
GTGGAAGCCC AGGCGGGGAC GCGCCTGGCG CAGCGGCGCG CGCGACTTTG GGCTCTGGTG
CTGGAAGCGC GCTACATCGA AAACCGGGTC GAGCCCGGAG GGGGAGGATG GCAAGTACTG
GTCCCCCCCT CACGGTTGGA GGACGCCTGC CGCGAACTGC GCCTTTACGC CGAGGAGAAC
CACAACTGGC CGCCTTTCCC GCCGCCGGTC CGCCCGATGG CCAAGAACAC GCTCCCCACC
CTCTGCGTAC TGCTGCTGCT CGCCACCTTC CACAACCTGA CCAACCTCGA CCTGACCGTG
ATGGGGCGCC ACCCGGTGAA CTGGGCCGAG ATCGGCAGCG CGCACGCCGG CGCCATCCTG
CGGGGCGAGT GGTGGCGCGT CGTCACCGCG CTCACCCTGC ACGCGGACGC GCTGCACCTC
ATGAGCAACC TCGCCATCGG CGGGTTCTTC ATCGTCTACC TCTGCCGGGA CCTAGGCTCC
GGGCTCGCCT GGAACCTGCT TTTGGCGTCA GGTGCCTGCG GCAACCTCGC CAACGCCTAC
ATTCAGCTCC CAAGCCACAA TTCGGTCGGC TCCTCCACAG CGGTCTTCGG AGCTGTAGGC
ATTCTGGGCG CGATTTCCAT GATGCGCTAC CGGCACCACC TGCGCAGACG CTGGCCCCTG
CCGGTCGCTG CGGCGCTCGC GCTGCTGGTG CTCCTCGGCA CCGAAGGGGA ACGCACCGAC
CTGGGTGCGC ACCTCTTCGG CTTCTGCTTC GGCTCGCTAT TCGGTGTGGT GGCGGAACTC
CTGGTGGGAT ACCTGGGGCA GCCGAAGCGG CTGGTCAACG CGCTCCTCGC GCTGGCCAGC
GCCTCGGTAG TCGTCGCCGC CTGGATGTCG GCGCTTAACT TTCAGGGGTA G
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| Protein sequence | MQSAFQVTQG EGSDILAAMK NEQEENLESA EEWVAVPPAK VEAQAGTRLA QRRARLWALV
LEARYIENRV EPGGGGWQVL VPPSRLEDAC RELRLYAEEN HNWPPFPPPV RPMAKNTLPT
LCVLLLLATF HNLTNLDLTV MGRHPVNWAE IGSAHAGAIL RGEWWRVVTA LTLHADALHL
MSNLAIGGFF IVYLCRDLGS GLAWNLLLAS GACGNLANAY IQLPSHNSVG SSTAVFGAVG
ILGAISMMRY RHHLRRRWPL PVAAALALLV LLGTEGERTD LGAHLFGFCF GSLFGVVAEL
LVGYLGQPKR LVNALLALAS ASVVVAAWMS ALNFQG
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