| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1955 |
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| Symbol | |
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| ID | 8137289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2265925 |
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| End bp | 2268954 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644869569 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003021766 |
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| Protein GI | 253700577 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 127 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CACGGAGGGA GTTTCTGCAG GGAGGGGCGC TGGCTACGGC ACTGGTCCTT
TCCGGCAAAA AAGCTGAAGC GGGCGGAGCC GACGCCCCGC AGATGCGCAC CAAGGGGCTG
AAAAGCTCGA CCACCATCTG CCCTTTCTGC GCGGTAGGTT GCGGGCTTGT GGTGCATACC
AAGAACGGCA AGATCGTCAA CATCGAGGGA GACATCCAGC ATCCGATCAA CCAGGGTGCG
CTCTGCTCGA AGGGTAGCGC GCTGTTCCAG GTCGCCAACA ACGAGCGCCG CCTGCAGAAG
GTCATGTACC GTGCTCCCGG CAGCGACAAG TTCGAAGAGA AGAGCTGGGA CTGGGCGCTG
GAGCGGATCA GCCAGAAGAT GAAGGAGACC CGCGACAAGA GCTTCAAGGC CAAAGAGATC
AACAAGAAGG ACAACAAGGA ATACGTGGTG AACCGCACCG AAGGGATGGC TTTCCTGGGG
GGCGCCGGTC TCGACAACGA GGAGTGCTAC CTCTGGAGCA AGTTCGCCCG CTCCATGGGG
GTCGCGAACC TCGAGCACCA AGCCCGAATA TGACACTCCG CTACAGTCGC CGGTCTGGCG
GCTTCGTTTG GACGTGGGGC AATGACCAAC CACTGGATTG ACCTGAAAAA CGCCGATGCC
ATCCTGGCCA TCGGTTGCAA CCCCGCTGAG AACCACCCGA TCTCGATGAA GTGGATCGAG
GCGGCCATGG ATAACGGCGG CAAGCTTTTA GCCGTCGACC CGCGCTTCAC CAGGACCGGT
TCCAAGGCCG ACCACTACGC GCAGATCCGT CCCGGCACCG ACATCGCCTT CCTGGGCGGG
ATGATCAACT TCGCGCTGCA GAACAACATG ATCCACGAGG AGTACGTCCG CGAGTACACC
AACGCCTCCT TCATCGTCAA CGACAAGTAC GACTTCAACG AGGGTATCTT CTGCGCCTTC
GACGACCAGG AGAAGACCTA CGACTCGAAG GCCTGGGCCT ACGCGCTCGA CGGCTCCGGC
AACGCCAAGC GCGACAAGTC GCTTAAGGAC CCGCGCTGCG TCTATCAGCT GCTGAAGAAG
CACTACTCCC GCTACACCGT CGACATGGTC TGCTCTATCA CCGGCACCAA GAAGGAAGAG
TACGTCGCCG TCGCCAAGGC TTTCTGCTCC ACCGGGCGCG CCGACAAGGC AGGCACCATC
CTCTACGCGA TGGGTATCAC CCAGTCCACC CACGGCACCC AGAACGTGCG CGCGGTAGCC
ATGCTGCAGA TGCTTCTGGG CAACATCGGC ATCGCCGGCG GCGGCGTCAA CGCGCTGCGC
GGCGAGAGCA ACGTGCAAGG CTCGACCGAC TACGGCCTGC TCTTCCACAT CCTGCCGGGC
TACCTGAAGT CCCCTGAGAT CGACAACGTG GACCTGAAGG CATACCTGGA GAAGTGGACC
CCGAAGACCA AGGACGCAAA GAGCGCCAAC TGGTGGGGGA ACACCCCGAA GTACACCGTA
AGCCTCCTGA AGGCCTGGTA CGGCGACAAC GCCAGCGCGG AAAACGGCTT CTGCTACGAC
TACCTCCCCA AGAGAAGCGG CAACTACTCC TTCATGAAAC TGATGGAGAA GATGGGCAAT
GGGGAACTGC AGGGTCTCGT CTGCATGGGG CAGAACCCGG CCGTAGGCGG CCCGGACTCC
CTGAAGACCC GCGAGGCGCT GGGGAAACTC GACTGGCTCG TCACCGTGGA CCTCTGGGAG
ACCGAGACCT CCATCTTCTG GAAGCGCCCC GGCGTTAACC CCAAGGAGAT CAAGACCGAG
GTCTTCATGC TGCCCGCCGC CTCCTCCGTC GAGAAGGAAG GCTCCATCTC CAACTCCGGC
CGCTGGGCCC AGTGGCGCTA CAAGGCCGCC GAACCGGTAG GGGAGGCGAA GAGCGACCTC
TGGATCATCG ACAAGTTCTT CAAGGGGATG AAGAAGGCCT ACGAGAAAGG GGGCGCGTTC
CCCGAGCCGA TCACCAAGCT CTCCTGGAAC TACGGCAACC ACGAGGAGCC CGATGTCCAC
CTGGTCGCCA AGGAGATCAA CGGCTACTTC ACCAAGGACA TGACCATCGT CGACAAGGAC
AAGACCCTGG AGTTCAAGAA GGGGGATCAG GTACCGATGT TCAAGTACCT GCAGGACGAC
GGCTCCACCG TCTCCGGCAA CTGGATCTAC TGCGGCTCCT ACACAAAAGA CGGGAACCTG
ATGGCCCGCC GCGACGAAAC CGACCCGACC GGGCTCGGCT TGTTCCCGAA GTGGTCCTGG
TGCTGGCCGG TCAACCGCCG CATCATCTAC AACAGGGGCT CCGTCAACCC CGACGGCGCG
CCGTTCAACC CCAAGCGCGC GGTCATCGCC TGGGACGCGC TGGAGAAGAA GTGGAAAGGG
GACGTACCCG ACGGCCCCTG GCCGCCGATG AACGACGCGA AGGAAGGGAA GTACCCCTTC
ATCATGCTGC CGGAAGGGCA CGGCCGCCTC TATGCGCTGG ACCTGAAGGA CGGTCCTTTC
CCGGAGCACT ACGAGCCTAT CGAGAGCCCG GCCAGGAACC TCATGTCCAA GGTGCAGAGC
AACCCCGCGG TCAAGGTCCC GGCCAACATG TCGAGCGACC TTAACAAGTA CCCGTTCGTC
GGCACCACCT ACAGGATGAC CGAGCACTGG CAGGCAGGGG CCATGACCCG CAGCCTGCCG
TGGCTGGTGG AGCTGGTCCC GACCATGTTC GTCGAGATCT CGCAGACGCT CGCCTCCTCC
AAGGGGATCA ACAACGGCGA CCAGGTGAGG ATCAGCACCG AGCGCGGTTC CATCGAGGCG
AAGGCCCTGG TCACCTCCAG GCTGAAGCCG TTCAACGTGC AGGGAAAAAT GGTGGAGCAG
GTGGGCCTTC CCTGGCACTT CGGTTATGCA GGTCTTGCTA CCGGCGACTC GGGCAACGTC
CTGACCCCGT CCGTCGGCTG CGCGAATACG AGCATCCCCG AGTTCAAGGC ATTCCTCTGC
AACATCGAGA AAGGGGGTAA ACGCGCATGA
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| Protein sequence | MAVSRREFLQ GGALATALVL SGKKAEAGGA DAPQMRTKGL KSSTTICPFC AVGCGLVVHT
KNGKIVNIEG DIQHPINQGA LCSKGSALFQ VANNERRLQK VMYRAPGSDK FEEKSWDWAL
ERISQKMKET RDKSFKAKEI NKKDNKEYVV NRTEGMAFLG GAGLDNEECY LWSKFARSMG
VANLEHQARI UHSATVAGLA ASFGRGAMTN HWIDLKNADA ILAIGCNPAE NHPISMKWIE
AAMDNGGKLL AVDPRFTRTG SKADHYAQIR PGTDIAFLGG MINFALQNNM IHEEYVREYT
NASFIVNDKY DFNEGIFCAF DDQEKTYDSK AWAYALDGSG NAKRDKSLKD PRCVYQLLKK
HYSRYTVDMV CSITGTKKEE YVAVAKAFCS TGRADKAGTI LYAMGITQST HGTQNVRAVA
MLQMLLGNIG IAGGGVNALR GESNVQGSTD YGLLFHILPG YLKSPEIDNV DLKAYLEKWT
PKTKDAKSAN WWGNTPKYTV SLLKAWYGDN ASAENGFCYD YLPKRSGNYS FMKLMEKMGN
GELQGLVCMG QNPAVGGPDS LKTREALGKL DWLVTVDLWE TETSIFWKRP GVNPKEIKTE
VFMLPAASSV EKEGSISNSG RWAQWRYKAA EPVGEAKSDL WIIDKFFKGM KKAYEKGGAF
PEPITKLSWN YGNHEEPDVH LVAKEINGYF TKDMTIVDKD KTLEFKKGDQ VPMFKYLQDD
GSTVSGNWIY CGSYTKDGNL MARRDETDPT GLGLFPKWSW CWPVNRRIIY NRGSVNPDGA
PFNPKRAVIA WDALEKKWKG DVPDGPWPPM NDAKEGKYPF IMLPEGHGRL YALDLKDGPF
PEHYEPIESP ARNLMSKVQS NPAVKVPANM SSDLNKYPFV GTTYRMTEHW QAGAMTRSLP
WLVELVPTMF VEISQTLASS KGINNGDQVR ISTERGSIEA KALVTSRLKP FNVQGKMVEQ
VGLPWHFGYA GLATGDSGNV LTPSVGCANT SIPEFKAFLC NIEKGGKRA
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