Gene GM21_1953 details

Gene Information

• Locus tag: GM21_1953
• ID: 8137287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 2262307
• End bp: 2264292
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644869567
• Product: histidine kinase
• Protein accession: YP_003021764
• Protein GI: 253700575
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 128
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCTTC CCAGGCTGCG CTTTCCCATA AAGACCAAGC TCACCGTGGC CACGCTCATC 
CCGCTGGGGA TCGCCATCCT CATCTGCTGG ATGGCCGGGG TCTTCATCCT GAGCGCCAAG 
GTGGCCGCCC AGGCCCAGGA GAAGGTCCGC TACGACCTGA GCGTCGCCCG CGAGGCGTAC 
CAGGGCGAGC TTTCGCGCAT CTACGACGTG GTGAAACTCA CCGCCTCCTT CGGCAGCACC 
GCCGAGACCA TCGCCTCCGG GGACCAGCGG GCGGTGAGCG AGGCGCTCTC CTCCGTACGG 
GCCGGCGAGC GCCTGGACAT ACTCGCCGCC GTGGACGCCT CGGGGAAGGT CATCTTCAGG 
GCCAACAACC CCGAGCTGCG CGGCGACGAC AAGAGCCGCA ACCAGTTCGT GGCCCGCGCC 
TTGAAGGGGG AGATCGCCAG CGGCACCACC ATCCTCCCCT CTTCCGAGCT GGAGCTCGAG 
GGGGATAGCC TGGTGCGCCA GGCGCGCGTC TATCCCGCCG CCGGGGCCCC GGTGCAGTTG 
AACGGCGCCA TGTTGCTCCT GGTCGCGGCG CCGGTGCGAG ACAAGGCGGG GAACCTACTG 
GGGGCGCTTT ACGGCGGGGT GCTCCTCAAC AACAACCAGA GGCTCGTGGA CCGGATCCGC 
TCCGTGGTCT ACGAGGGTGC GCGTAAAAAC GGCAGGGACG TGGGGAACTC CACCATCTTC 
CAGGGGGACA TAAGGGTCGC CACCAACGTC CCCAACACCG ACGGCAGCCG GGCCGTCGGC 
ACCAGGCTCT CCGCGCCGGT CCAGGAGCGG GTGCTCCTCA AGGGGGCCAA GTGGGTAGAC 
CGCGCCTTCG TGGTGAACGA CTGGTACCTG ACCGCCTACG AGCCGATCCT CTCGCTGCAG 
GGGGTCCCGA TCGGCGCCCT TTACGTCGGG ATGCTGGAGA GCCAGTACTC GGCGGTCAAG 
ATCGACATGG CGGTCCTTTT GAGCTTCGTC CTTTTGGTGA GCGGCCTGGT GGGAGTCTCG 
ATGGCCGGGT TCCTGGGGAA AAAACTCTCC CAGCCCATAC GCGAGCTCGA TTCCCTGGCG 
CGCCGTGTGG CGGCGGGAGA GCGCAACGTG AAAAGCAGCA TCGATTCGCG CGACGAGATC 
GGGGACCTGG CGGGGAGGTT CAACGACATG AGCCGTTCGC TCGTGGAGCG CGAGGACAGC 
ATCATCGAGC TGAACCGGAA CCTGGAAGAG AAGGTGCAGT CGAGAACGGC AGAGCTTGAG 
GAGAAGAACC GGCTCCTGGT GCAGACCCGT GAGGAGCTGG TGCGGGTGGA GAAGCTGGCG 
GCGATAGGCG AGCTGGCGGC GGGGGTCGCG CACGAGATCA ACAACCCGAT GGCGATCATC 
CGCGGCAACA CGGAGCTGTT GCAGCTCTCG GTGCCGGAAG ACGCACCGAT CCGGGAGGAA 
GTGGACACCA TTTTCCAGCA GGTGAAAAGG GTGGAGCGGA TCGTGTCGAA CCTGTTGAAG 
TTCGCCAGGC GCGAGCAGAT GGAAGCGGGC ACCGTGCGGC TGAACGAGCT CTTGCACGAG 
ATCGTCGGCC AGATCGGGCA CCAGGTGTCG CTTGAGGGGA TAGAGATAGT CGAGCAGTAT 
GCGGAGAGCG TGGCGCAGGT GGAGGGGGAT GCGGACCAGT TGCGGCAGGT GTTCACCAAC 
CTGGTCTTGA ACGCGGTGCA GGCGATGCCG GCAGGGGGAG TTCTTTCGGT GCGGACCCGG 
CCATTAGAGC CGGAGCGCAG CTACGAGGTG AAGGTCGCCG ACACCGGCGT CGGCATCGCG 
CTGGAAAACC TGAGGCAGGT ATTCAACCCC TTTTACACCA CCAAGGCCAA CGGCACCGGC 
CTGGGACTTT CCGTCTCCTA CGGCATCGTC CGCGAGCACG GCGGGCTCAT AGACGTAGAG 
AGCGTCCCGG ACGGGGGGAG CACCTTCACC GTGGTGCTCC CGCGCTCCCA GGCCCCGGGC 
GCCTAA 

 

Protein sequence

MNLPRLRFPI KTKLTVATLI PLGIAILICW MAGVFILSAK VAAQAQEKVR YDLSVAREAY 
QGELSRIYDV VKLTASFGST AETIASGDQR AVSEALSSVR AGERLDILAA VDASGKVIFR 
ANNPELRGDD KSRNQFVARA LKGEIASGTT ILPSSELELE GDSLVRQARV YPAAGAPVQL 
NGAMLLLVAA PVRDKAGNLL GALYGGVLLN NNQRLVDRIR SVVYEGARKN GRDVGNSTIF 
QGDIRVATNV PNTDGSRAVG TRLSAPVQER VLLKGAKWVD RAFVVNDWYL TAYEPILSLQ 
GVPIGALYVG MLESQYSAVK IDMAVLLSFV LLVSGLVGVS MAGFLGKKLS QPIRELDSLA 
RRVAAGERNV KSSIDSRDEI GDLAGRFNDM SRSLVEREDS IIELNRNLEE KVQSRTAELE 
EKNRLLVQTR EELVRVEKLA AIGELAAGVA HEINNPMAII RGNTELLQLS VPEDAPIREE 
VDTIFQQVKR VERIVSNLLK FARREQMEAG TVRLNELLHE IVGQIGHQVS LEGIEIVEQY 
AESVAQVEGD ADQLRQVFTN LVLNAVQAMP AGGVLSVRTR PLEPERSYEV KVADTGVGIA 
LENLRQVFNP FYTTKANGTG LGLSVSYGIV REHGGLIDVE SVPDGGSTFT VVLPRSQAPG 
A