Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1932 |
Symbol | |
ID | 8137266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2242315 |
End bp | 2243457 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644869546 |
Product | cysteine desulfurase family protein |
Protein accession | YP_003021743 |
Protein GI | 253700554 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 96 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCT TCCTTGATAA CGCCGCGACC TCATTCCCAA AACCGGAAAC GGTCTACCAG GCCATGGACG CCGCCCTGCG TGAAGTCGGG GTGGCGCCGG GAAGGGGGGG GTACCGGCAG TCCCTCGCTG CAGCCCGCAT TGTCTACGAA GCCAGGTCGG CGCTGGCGCG TTTTTTCGGC GTCTCGGACT CATCCCGCCT TATCTTCACC CACAGCGCAA CGGAATCCAT CAATATCGCG GTCAACGGGC TTTTGAAGCC GGGCGACCAC GTGGTATCCA CCCGCGTCGA GCACAACGCG CTGCTGCGTC CGCTGCACCT GGCGGCAAGC CGTGGCGTCG AAGTGAGCTA CGTCCCTTCG GACCGCTTCG GGGTGGTGTC GGAGCGGGAG ATAGAGCGGG CGATGCGCCC CGGCACGAGG CTCGTGGCGC TGGCTCACTG CTCGAACGTT ACGGGGGCGG TGCAGCCGAT CGAGGCGATT GCCCGGGTGG CGCGGCGAAA TGGCGCGCTT TTCCTGGTGG ACGCGGCGCA AAGCGCCGGC TTTTTTCCCA TCGACGTGGA GCTGACCGGA ATCGATCTCC TCGCTGCACC TGGGCACAAG GGGCTTTACG GCCCACCCGG CACCGGCGTC CTCACCATCG CCGAGGGGCT CAACCTGGAA CCGCTGTTGG TGGGAGGGAC CGGAGGAAGC GCAAGCAGCC CCGAGCAGCC CGACCAGCTC CCCGAGCGGC TGGAGAGCGG CACCATCAAC ACCCCTGCCA TCGCCGGCCT CAAGGCGGGG GTCGAATTCG TGCTCTCTAC CGGGATCGAG GTGATACGGG CCAAGGAAGA GCAACTGGTC AACCGGCTCT TGGCAGGGCT GCGAGCCACG CCTGGCGTCG AGGTCTACGG GCCGCCGGAA GGGGAGCGGG GCGCCGCGGT TTCCTTCAAC GCGGCAGGGC ACGATCCGGC GGCGGTGAGC TTCCTTCTGG ATTCCGACTA CGACATAAGC GTCCGAGCCG GGGTCCACTG CGCCCCGGAC ACGCACCGAA GCATCGGGAC CTATCCGACC GGAACGGTCA GGGTCAGTCC CGGTTTCTTC AACACCGAGG CGGACATAGA CTTTTTCCTC AAAGCCCTGC GCGAGATCAC GGCGCGCCGC TAG
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Protein sequence | MPVFLDNAAT SFPKPETVYQ AMDAALREVG VAPGRGGYRQ SLAAARIVYE ARSALARFFG VSDSSRLIFT HSATESINIA VNGLLKPGDH VVSTRVEHNA LLRPLHLAAS RGVEVSYVPS DRFGVVSERE IERAMRPGTR LVALAHCSNV TGAVQPIEAI ARVARRNGAL FLVDAAQSAG FFPIDVELTG IDLLAAPGHK GLYGPPGTGV LTIAEGLNLE PLLVGGTGGS ASSPEQPDQL PERLESGTIN TPAIAGLKAG VEFVLSTGIE VIRAKEEQLV NRLLAGLRAT PGVEVYGPPE GERGAAVSFN AAGHDPAAVS FLLDSDYDIS VRAGVHCAPD THRSIGTYPT GTVRVSPGFF NTEADIDFFL KALREITARR
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