Gene GM21_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1914 
Symbol 
ID8137248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2221065 
End bp2221727 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content58% 
IMG OID644869528 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_003021725 
Protein GI253700536 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACG ACCAGATACA CCAGGCCGTC GCCATCCTCA AGGATGCGGT GCTGACAAAG 
GGGTGGGTGA CTCCGGCGGT CACCATCGTC GCCACGCAGG ACCGCGACCC CTACAAGGTG 
CTGGTTTCCT GCATTCTATC CCTGAGGACC CGCGATCAGA CCACGGCCGA GGCCTCACAG 
CGGTTGTTTG CGCTCGCCGA TACGCCGCAG AAGATGGCGG AACTCAGTGT CCCCGAGATC 
GAGCAGGCCA TCTACCCCGT CGGGTTTTAC CGGGTCAAGG CCCAGCAGAT TTTAGAACTC 
TCGTTCCAAA TCCGTGAACT GTACCAGGGG AGGGTGCCCG ACGAGTTGGA GACCCTGCTT 
ACCTTCAAGG GAGTGGGGCG CAAGACGGCT AACCTGGTGC TGACGCTTGG ATATGGCAAA 
CCCGGCATCT GCGTCGACAT CCACGTGCAC AGGATCTGCA ACAGGTGGGG GTATGTAAAA 
ACAGGCACGC CAGAGCAGAC AGAGGGTGCT TTGAGAAAGA AGCTCCCGCC TGAGTACTGG 
ATCATAATCA ACGATCTTCT AGTCACTTTC GGACAAAACC AGTGCACCCC TGTCTCACCG 
CGCTGCTCCA ACTGTCCCCT ATATGCGCTC TGTGACAGGG TCGCTGTTGC CAGGTCTCGA 
TAA
 
Protein sequence
MKDDQIHQAV AILKDAVLTK GWVTPAVTIV ATQDRDPYKV LVSCILSLRT RDQTTAEASQ 
RLFALADTPQ KMAELSVPEI EQAIYPVGFY RVKAQQILEL SFQIRELYQG RVPDELETLL 
TFKGVGRKTA NLVLTLGYGK PGICVDIHVH RICNRWGYVK TGTPEQTEGA LRKKLPPEYW 
IIINDLLVTF GQNQCTPVSP RCSNCPLYAL CDRVAVARSR