Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1869 |
Symbol | |
ID | 8137200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2173692 |
End bp | 2175101 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644869480 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003021680 |
Protein GI | 253700491 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCC ACCTCTATCC CGCCAGACCG ATACTTCTGG TGGACGACGA GGCGCCGTGG CTGCGCAGTC TCTCCCTGAG CCTGCGTGAA GCCGCAGGCA TAACCAACGT CATCAAATGC ACAGACAGCC GCGATGTGTT GAAAATCGTG CGAGAGAACG ACGTCATCCT GATCCTGCTG GACCTGACGA TGCCCAACTT CTCCGGGCGG GATCTACTGA CCATGCTAGG CAGCGATCAT CCCGACGTTC CCGTCATAGT TCTCAGCGGT CTTAATCAAG TAGATACTGC CGTGAACTGC ATGCATCTGG GTGCAGTAGA TTACTTTGTG AAGACAGTGG AGAAGGAACG GCTGATAACC GGGATACAGA AGGCCCTCTG CAGCAGGCAA CGGGATATGG GGGGTGACCA GTTCGGGGTG GCGGTCAAGA AAGAGTGCCT GGAGCATGCT GAGGCCTTTG CCCCGATTAA AACATGCAGC GACAAGATGA GAGCCACCAT GCGGTACTGT GAAGCCGTGG CGTCCAGCAG CGAACCGATC CTGATCACCG GCGAGAGCGG AGTCGGCAAG GAATTATTCG CCCGTGCCAT CCACACCATC AACAGTACGG AAGGACCGCT TGTGTCGGTA AATGTGGCGG GTCTGGATGA CAACGCCTTT TCCGATACCC TTTTCGGTCA TACCAAAGGC GCCTTTACCG GAGCCGAGCG GGGGCGGCGG GGGATGATAG AGGAGGCTGG CCGAGGTGTC CTTTTTTTGG ATGAAATCGG GGACTTAAGC AACGCCTCCC AGGTGAAGCT GCTGCGCTTA CTCCAGGAGG GGGAGTACTT TCCCCTGGGG GCCGACGCAC CGAAAAAGCT CAAGGCAAAG CTGGTCTTTG CGACCCACCA GGAACTAGCG ATCAACAAGG AGACAGGGCT TTTCCGCAGC GACCTCTATT ACCGCATCAG CACGCACCAG GTGCGCATTC CACCTCTGCG GGAGCGCCTT GAGGATATTC CTTTGCTGCT GGAGACCTTT CTCAAGGAAG CGGCCCGCTG CTTCGGAAAA CAGCCACCCA CCGTCCCAAA GGAGTTGGGC ACCCTGCTCT CCATTTACAG CTTTCCTGGA AACGTACGGG AATTGCGCGC CATGGTCTTC AACGCAGTCG GCCTGAACCG AAGCCATCAG CTTTGCCTCG ACAGCTTCAA GGAAAAGCTC GGGCTCTCGG AAGACCCGGT GCGAAGTGAT GCACTGGCGG CAACCGGTAA CACGGTGGTT TTCCCGGACC GGTTGCCAAA GCTTGGGGAA GTGGGGTGCC AGGTCGTCGC GGAAGCGATG CGCCGAGCCA ATGGGAACCA GACAGCCGCG GCCGCCATGC TGGGCATCAC CCGTCAGGGA CTCGCCAAAA GGCTGAAGAA AGCGCATTGA
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Protein sequence | MTVHLYPARP ILLVDDEAPW LRSLSLSLRE AAGITNVIKC TDSRDVLKIV RENDVILILL DLTMPNFSGR DLLTMLGSDH PDVPVIVLSG LNQVDTAVNC MHLGAVDYFV KTVEKERLIT GIQKALCSRQ RDMGGDQFGV AVKKECLEHA EAFAPIKTCS DKMRATMRYC EAVASSSEPI LITGESGVGK ELFARAIHTI NSTEGPLVSV NVAGLDDNAF SDTLFGHTKG AFTGAERGRR GMIEEAGRGV LFLDEIGDLS NASQVKLLRL LQEGEYFPLG ADAPKKLKAK LVFATHQELA INKETGLFRS DLYYRISTHQ VRIPPLRERL EDIPLLLETF LKEAARCFGK QPPTVPKELG TLLSIYSFPG NVRELRAMVF NAVGLNRSHQ LCLDSFKEKL GLSEDPVRSD ALAATGNTVV FPDRLPKLGE VGCQVVAEAM RRANGNQTAA AAMLGITRQG LAKRLKKAH
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