Gene GM21_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1869 
Symbol 
ID8137200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2173692 
End bp2175101 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content58% 
IMG OID644869480 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003021680 
Protein GI253700491 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCC ACCTCTATCC CGCCAGACCG ATACTTCTGG TGGACGACGA GGCGCCGTGG 
CTGCGCAGTC TCTCCCTGAG CCTGCGTGAA GCCGCAGGCA TAACCAACGT CATCAAATGC
ACAGACAGCC GCGATGTGTT GAAAATCGTG CGAGAGAACG ACGTCATCCT GATCCTGCTG
GACCTGACGA TGCCCAACTT CTCCGGGCGG GATCTACTGA CCATGCTAGG CAGCGATCAT
CCCGACGTTC CCGTCATAGT TCTCAGCGGT CTTAATCAAG TAGATACTGC CGTGAACTGC
ATGCATCTGG GTGCAGTAGA TTACTTTGTG AAGACAGTGG AGAAGGAACG GCTGATAACC
GGGATACAGA AGGCCCTCTG CAGCAGGCAA CGGGATATGG GGGGTGACCA GTTCGGGGTG
GCGGTCAAGA AAGAGTGCCT GGAGCATGCT GAGGCCTTTG CCCCGATTAA AACATGCAGC
GACAAGATGA GAGCCACCAT GCGGTACTGT GAAGCCGTGG CGTCCAGCAG CGAACCGATC
CTGATCACCG GCGAGAGCGG AGTCGGCAAG GAATTATTCG CCCGTGCCAT CCACACCATC
AACAGTACGG AAGGACCGCT TGTGTCGGTA AATGTGGCGG GTCTGGATGA CAACGCCTTT
TCCGATACCC TTTTCGGTCA TACCAAAGGC GCCTTTACCG GAGCCGAGCG GGGGCGGCGG
GGGATGATAG AGGAGGCTGG CCGAGGTGTC CTTTTTTTGG ATGAAATCGG GGACTTAAGC
AACGCCTCCC AGGTGAAGCT GCTGCGCTTA CTCCAGGAGG GGGAGTACTT TCCCCTGGGG
GCCGACGCAC CGAAAAAGCT CAAGGCAAAG CTGGTCTTTG CGACCCACCA GGAACTAGCG
ATCAACAAGG AGACAGGGCT TTTCCGCAGC GACCTCTATT ACCGCATCAG CACGCACCAG
GTGCGCATTC CACCTCTGCG GGAGCGCCTT GAGGATATTC CTTTGCTGCT GGAGACCTTT
CTCAAGGAAG CGGCCCGCTG CTTCGGAAAA CAGCCACCCA CCGTCCCAAA GGAGTTGGGC
ACCCTGCTCT CCATTTACAG CTTTCCTGGA AACGTACGGG AATTGCGCGC CATGGTCTTC
AACGCAGTCG GCCTGAACCG AAGCCATCAG CTTTGCCTCG ACAGCTTCAA GGAAAAGCTC
GGGCTCTCGG AAGACCCGGT GCGAAGTGAT GCACTGGCGG CAACCGGTAA CACGGTGGTT
TTCCCGGACC GGTTGCCAAA GCTTGGGGAA GTGGGGTGCC AGGTCGTCGC GGAAGCGATG
CGCCGAGCCA ATGGGAACCA GACAGCCGCG GCCGCCATGC TGGGCATCAC CCGTCAGGGA
CTCGCCAAAA GGCTGAAGAA AGCGCATTGA
 
Protein sequence
MTVHLYPARP ILLVDDEAPW LRSLSLSLRE AAGITNVIKC TDSRDVLKIV RENDVILILL 
DLTMPNFSGR DLLTMLGSDH PDVPVIVLSG LNQVDTAVNC MHLGAVDYFV KTVEKERLIT
GIQKALCSRQ RDMGGDQFGV AVKKECLEHA EAFAPIKTCS DKMRATMRYC EAVASSSEPI
LITGESGVGK ELFARAIHTI NSTEGPLVSV NVAGLDDNAF SDTLFGHTKG AFTGAERGRR
GMIEEAGRGV LFLDEIGDLS NASQVKLLRL LQEGEYFPLG ADAPKKLKAK LVFATHQELA
INKETGLFRS DLYYRISTHQ VRIPPLRERL EDIPLLLETF LKEAARCFGK QPPTVPKELG
TLLSIYSFPG NVRELRAMVF NAVGLNRSHQ LCLDSFKEKL GLSEDPVRSD ALAATGNTVV
FPDRLPKLGE VGCQVVAEAM RRANGNQTAA AAMLGITRQG LAKRLKKAH