Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1857 |
Symbol | |
ID | 8137188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2160061 |
End bp | 2160798 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869468 |
Product | short chain dehydrogenase |
Protein accession | YP_003021668 |
Protein GI | 253700479 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 0.960393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG CAGGAAAAAC AGTTTTGGTG ACGGGCGCAA ACGGCGGGAT CGGTCGTGCT CTGGTCGAGG GATTGCTAAA AAAAGGCGCC GCCAAGGTTT ACGCGGCGGC AAGGACCATC GAAGCCGTGG CGGAACTTTC GAAAATCGAC GCGCGGGTGA CGGCCGTAAG GCTCGAGGTC ACCCATGCCA CGAGCGTGGC CGCGGCAGCG GACCATTGCC CGGACGTGGA CCTCGTCGTC AACAACGCAG GGATCAACCG CTGCGCGGGG TTTATGGCTG AAAACGCCAT GGAGAACGCG CACCAGGAGA TGAAGGTCAA CTACCTGGGG ACGCTTGCCA TGTGCCGCGC CTTCGCCCCG GCCCTCATCG AGCGCAAAGG GTGCATCGTC AACGTTTGTT CCGTCATCGG GCTGGTCAAC CTCCCGGTCA ACGGCACCTA CAGCGCCTCT AAGGCGGCGG GGCACTCTCT GCTGCAGGGG ATCCGGGCCG AATTGGCGCC GCGCGGCGTC AAGGTGCTAG GTGTTTATCC CGGCCCGGTC GACACCAGGA TGACCTCAGG GCAGGAGATG CCCAAGGCGA CTACCGAGGA AGTGGTGCAA GCGATACTGG AAGGAATCGA AAGGGAGCAG GAGGAGATTT ATCCCGACGC GATGTCGAAA GAGGTTTCCG CGGCTCTCAA GCAGGCGCCC AAAGAGGTCG AGCGGCAGTT CGCCGCCATG ATCCCGGCCC AAGGGTAG
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Protein sequence | MDIAGKTVLV TGANGGIGRA LVEGLLKKGA AKVYAAARTI EAVAELSKID ARVTAVRLEV THATSVAAAA DHCPDVDLVV NNAGINRCAG FMAENAMENA HQEMKVNYLG TLAMCRAFAP ALIERKGCIV NVCSVIGLVN LPVNGTYSAS KAAGHSLLQG IRAELAPRGV KVLGVYPGPV DTRMTSGQEM PKATTEEVVQ AILEGIEREQ EEIYPDAMSK EVSAALKQAP KEVERQFAAM IPAQG
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