Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1812 |
Symbol | |
ID | 8137143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2111537 |
End bp | 2113858 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644869423 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003021623 |
Protein GI | 253700434 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.021882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACG CACTGCGTAT CCTGATCGTG GACGATTCCC CCGAAGATGC CGCACTCATC GTGCGTCAAC TGCAGAGGGA GTTCTCCGTA AGCTACGAGC GCGTCGAGAC CCCGGACGAA ATGGAGTCGG CACTGGACAA GGGGGGATGG CACATCGTCA TCTCGGACTA CGTCATGCCG AAGTTCAGCG GGCTCGCGGC GCTCAAGCTC CTTCACGACC GCGGGATGGA ACTCCCTTTC ATCATGGTCT CCGGGCAGAT GGGCGAGGAC GCGGCCGTGG AAGCGATGCG CGCCGGCGCA CATGACTACC TGCTGAAGGA CAGGCTCTCC AGGCTGATCC CCGCGATCAA GCGGGAATTG AACGACGCCG TGGTGCGCCG CGAGAGGAGG ATGGCGGAGG AGGCCCTCTC GGCGACGGAG GCGCGCTTCC ACAGTCTGGT GGAGCAGTCA CTGGTCGGCA TATTCATGCT GCAGGACGAC ATCTTCATCT ACGTGAACCC AAAGTTCGGC GAGATCTTCG CCTACGAGCC GCAACAGCTG ATCGAATCGA GATCTCTGCT GGAACTGGTC GCCCCCGAGG ATCAGATCAA GGTGATGACC CGGTTCCTGC GCCCCCTCAT GGAGGGAAAC GACAGTCTGC ACTACTTCTT CCGCGGCAAG CGCCGCGACG GGTCCCTGAT CGATCTCGAG GTGAACGGCA CCCGGACCAG GGTGAACGGC AGCGCTGCCA TCATAGGCAC CCTGCTCGAC ATAACCGAGC GCAAGCACGC CGAGGCGGAA CTGAGCAAGC TGTGGCGCGC CGTCGAGCAA AGCCCGGTAT CGGTGGTGAT AACCGATCTC TTCGGCAGGA TCGAGTACGT GAACCCGAAG TTCATCGAGG TGACCGGCTA CACCGAGGAG GAACTGATCG GGAAGAACCC TAACATCCTG AAATCCGGGA TGACCGACGC CAAGGTGTAC GAGGAACTTT GGTCCACCAT AACCTCGGGC CGGGAGTGGC ACGGCGAGCT GCACAACAAG AAAAAGAACG GGGAGCTCTT CTGGGAGAGC GGGCACATCT CCGCCATAAA GAACGCCGAG GGGCAGATCA CCCATTTCGT CGGGGTCAAG GAGGATGTAA CCGAGAGGAA GCTTGCCATC GAACAGTTGA GGCAGGTACA GAAGATGGAG GCCATAGGCC GGTTGGCAGG CGGCATCGCC CACGACTTCA ACAACCTCCT CACCGTCATC AACGGTTACT CCACGCTCCT GGTTAGATCC CTCGACAAGG GGTCGCCGAC ACACAAGGAA GCGGAGCAGA TCCTGCGCGC CGGCGAGCGG GCCGCCGACC TTACCAGGCA GCTGTTGAGC TTCAGCAGAA GGCAGATCAT GGAGCCGAGG GTGCTGAACA TCAACAAGCA AGTCAGAGCG GTACAGAAGA TGCTGGAACG GCTGATCGGG GAGCACATCG GGCTCGTCAC CACCCTCTCC GAGGACGCCG GCTTCGTCAA GATGGACCCG GGGCAGATGG AACAGATCGT CATGAACCTG ATCGTCAACG CCCGCGACGC CTCCGAGACC GGCGCGGTGA TCGCCATGTC CACTGACAAC GTCGACCTGG ACCAGAATTT TTCGCACCTG CACCCGGGGT CGGTGCCCGG AAGCTATGTC AGGCTGAGCG TGGCGGACCA GGGGCAAGGG ATGACCGAGG AGGTGAAGCA GCACCTCTTC GAACCCTTCT TCACCACAAA GGAGATGGGT CGCGGCACGG GCCTCGGTCT CGCCACCGTG TACGGCATCG TGAAGCAAAG CGGAGGTTAC ATCGAGGTGG TCAGCGAGCC GGGACGGGGA GCCTGCTTCA ACATCTATCT CCCCCGCGTC TCGGAGCCCG CTCCGGCGCC GCCCGCGCCG CCGGCCGACG AAGAGATAGA TTCCTCCCAC GTCATACTCG TCGTGGAGGA CGAACCGGGG GTGCTCAACC TGGTGGTGCA CACCTTGCGC ATGCGTGGTT TCACCGTCTT CGAAGCAACG GACCCCGACC AGGGGATCAC CCTTTTCGAG GAGCACGCCC ATGAGATAGA CATGCTCCTC ACCGACGTGG TGATGCCGTT CATGAGCGGC CCGGCCCTGG CGGAGCTGTT GATCTCCAAA AAACCCGGAT TGAAGGTGCT GTTCATGTCC GGGCATACCG ACGACAGGGC CGGTTTCGAG AAGATATTGG AAAAAGGGAT GCAATTCCTG CCCAAACCGT TTGCCAGCGA CGCACTGATC AGAAAGGTGA GAGACACGCT GAGCGAGGGG GCGGCAAAGG CGGCAGGAGC GATTTCAGGA GGTAGCAATT GA
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Protein sequence | MKHALRILIV DDSPEDAALI VRQLQREFSV SYERVETPDE MESALDKGGW HIVISDYVMP KFSGLAALKL LHDRGMELPF IMVSGQMGED AAVEAMRAGA HDYLLKDRLS RLIPAIKREL NDAVVRRERR MAEEALSATE ARFHSLVEQS LVGIFMLQDD IFIYVNPKFG EIFAYEPQQL IESRSLLELV APEDQIKVMT RFLRPLMEGN DSLHYFFRGK RRDGSLIDLE VNGTRTRVNG SAAIIGTLLD ITERKHAEAE LSKLWRAVEQ SPVSVVITDL FGRIEYVNPK FIEVTGYTEE ELIGKNPNIL KSGMTDAKVY EELWSTITSG REWHGELHNK KKNGELFWES GHISAIKNAE GQITHFVGVK EDVTERKLAI EQLRQVQKME AIGRLAGGIA HDFNNLLTVI NGYSTLLVRS LDKGSPTHKE AEQILRAGER AADLTRQLLS FSRRQIMEPR VLNINKQVRA VQKMLERLIG EHIGLVTTLS EDAGFVKMDP GQMEQIVMNL IVNARDASET GAVIAMSTDN VDLDQNFSHL HPGSVPGSYV RLSVADQGQG MTEEVKQHLF EPFFTTKEMG RGTGLGLATV YGIVKQSGGY IEVVSEPGRG ACFNIYLPRV SEPAPAPPAP PADEEIDSSH VILVVEDEPG VLNLVVHTLR MRGFTVFEAT DPDQGITLFE EHAHEIDMLL TDVVMPFMSG PALAELLISK KPGLKVLFMS GHTDDRAGFE KILEKGMQFL PKPFASDALI RKVRDTLSEG AAKAAGAISG GSN
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