Gene GM21_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1810 
Symbol 
ID8137141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2108934 
End bp2110382 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content60% 
IMG OID644869421 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003021621 
Protein GI253700432 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.00345901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAA AATTGCTCAT ATTGGATGAC GATCACGACA TCCTGCTCAT GCTAAAGAGC 
GTCTTCGCGG GCGAGGATTA CGAGCTGCTG TTGGAAAGCG ACAGCGAAGG GGCACTCAAG
CGCGTCATCT CCGATCGTCC CAACGTGGCC ATCATGGACA TCAGTCTGCC GCAGAAGTCG
GGCATAGAGG TGCTAAAGGA AGCGAAGAAG ATCGACCCCG GCCTCGCCGT CATCATGGCC
ACCGGCTACA AGACCACGCA AAACGCCATC GAGGCGATGA AACACGGCGC CTTCGACTAC
GTCACCAAGC CCTTCGACAT GACGAAGCTC AAGGGGGCGG TGAAGAAGGC TCTGGAGTGC
AATCTTCTGA GCCGCAAGGT CCGTTACACC CGCGAACGCC CGCAGGTTGA GGAGGATCTC
ACCGAGGACC TGATGATAGG TTCCTCGCCG GAGATGATCG AGATCTGGAA GATGGTGGGG
ACCGTGGCCG ATTCCGACGC GACCGTGCTG ATACAGGGCG AGTCGGGAAC CGGGAAGGAA
CTGCTGGCCC GCGCGGTCTA CAACAACTCC AAGAGGAAAA ACCGCCCCTT CCTAGCGGTC
AACTGCGCGG CACTTCCCGA GGCGCTGCTG GAATCCGAGC TTTTCGGTCA CGAGAAGGGA
GCCTTCACCG ACGCCCATTC CAGGAGGATC GGGAAGTTCG AGCAGTGCAA CGGCGGCACC
ATCTTCCTCG ACGAGATAGG CGAGATGAGC CAGGCGAACC AGGGGAAGTT CCTGCGGGTC
CTGGAGAACC AGGAGTTCGA GCGGGTGGGG GGGAACGAGA CCATCAAGGT GGACGTCCGG
GTGATCGCGG CGACCAACAA GAGCCTCATC GCCAACGTCA AGGACAAGAC CTTCCGGATG
GACCTTTACT ACCGCCTGCG CGTGGTGAAC TTCTTTCTGC CGCCGCTGCG GGACCGCACC
GAGGACATAC CGCTGCTGGT CGACCTCTTC GTCAAGAAGT TTTCCAAGAA GTACGGCAAG
AACATCAAGG CGGTGGCGCC CGAGACCCTG GCCATGCTGA TGTCCCACCC GTGGGAAGGA
AACATCCGGG AGCTGAAGAA CGTGATCAAC TCGGCGACCG TTTTCTGCCG CGGCGACATC
CTGGTCCCCG GAGACTTCGA GTCCTTCCTG ACCGCCAAGG CGGGGTTCAA GGAAGTCGAC
CTTGAGACGG CCGGCGACGA CTACTACGAG GTCTTCTGGA GCATGCTGGA ACCGGTCTTC
GACGGGATCT GCCAGAAGAA CAAGGGGGCG ATCTACGAGA GCGTCAACAT GGGGCTGGAG
AAGGCCTTGA TCCACATGGC CATGGAGAAG AGCAACAACA ACCAGGTCTT TGCCGCGAAG
CTCCTGGGCA TCAGCCGCAA CACCCTTAGG GACAGGCTGG AGCGCTACCG CATAGGCGCC
GCCGACTAG
 
Protein sequence
MTAKLLILDD DHDILLMLKS VFAGEDYELL LESDSEGALK RVISDRPNVA IMDISLPQKS 
GIEVLKEAKK IDPGLAVIMA TGYKTTQNAI EAMKHGAFDY VTKPFDMTKL KGAVKKALEC
NLLSRKVRYT RERPQVEEDL TEDLMIGSSP EMIEIWKMVG TVADSDATVL IQGESGTGKE
LLARAVYNNS KRKNRPFLAV NCAALPEALL ESELFGHEKG AFTDAHSRRI GKFEQCNGGT
IFLDEIGEMS QANQGKFLRV LENQEFERVG GNETIKVDVR VIAATNKSLI ANVKDKTFRM
DLYYRLRVVN FFLPPLRDRT EDIPLLVDLF VKKFSKKYGK NIKAVAPETL AMLMSHPWEG
NIRELKNVIN SATVFCRGDI LVPGDFESFL TAKAGFKEVD LETAGDDYYE VFWSMLEPVF
DGICQKNKGA IYESVNMGLE KALIHMAMEK SNNNQVFAAK LLGISRNTLR DRLERYRIGA
AD